RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 DAP3P51398 398 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 ZNF84P51523 738 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 SEC24CP53992 1094 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 ST3GAL3Q11203 375 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 HSP90B2PQ58FF3 399 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 VTCN1Q7Z7D3 282 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 PAQR4Q8N4S7 273 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC30A7Q8NEW0 376 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 PRRC1Q96M27 445 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 SOX7Q9BT81 388 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 RHCGQ9UBD6 479 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC7A8Q9UHI5 535 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 DUSP13Q9UII6 198 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 CENPBD1B2RD01 187 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 M0R233 179 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC2A10O95528 541 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 FAM157BP0CG42 384 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 IGFBP5P24593 272 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 MDH1P40925 334 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 ALDH3B1P43353 468 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 RPS23P62266 143 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 LIPEQ05469 1076 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 MAD2L1BPQ15013 274 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC36A2Q495M3 483 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 FAM166AQ6J272 317 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 TMEM53Q6P2H8 277 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 LRRC18Q8N456 261 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 LZICQ8WZA0 190 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 HDAC2Q92769 488 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 BPIFA2Q96DR5 249 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 SHARPINQ9H0F6 387 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 MS4A5Q9H3V2 200 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 CHODLQ9H9P2 273 aa18.29■□□□□ 0.52
CSNK1D-216ENST00000581108 J3KTA2 159 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 LILRA1O75019 489 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 IFI30P13284 250 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 CDAP32320 146 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 ZNF133P52736 654 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 RIN1Q13671 783 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 NRN1LQ496H8 165 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 C10orf128Q5T292 105 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 HDDC2Q7Z4H3 204 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 ARPINQ7Z6K5 226 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 DPPA2Q7Z7J5 298 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 MEX3DQ86XN8 651 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 OR51B6Q9H340 312 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 TXNIPQ9H3M7 391 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 MAN2C1Q9NTJ4 1040 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 KCNS2Q9ULS6 477 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 HIF3AQ9Y2N7 669 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 AP3M1Q9Y2T2 418 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 UGT2A1Q9Y4X1 527 aa18.28■□□□□ 0.52
CSNK1D-216ENST00000581108 IGKV1D-43A0A0B4J1Z2 117 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 CXCR6O00574 342 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 NME4O00746 187 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 FFAR1O14842 300 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 ZNF682O95780 498 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 TGFAP01135 160 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 HPXP02790 462 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 MMP7P09237 267 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 TACSTD2P09758 323 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 MAKP20794 623 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 IL2RGP31785 369 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 IFNA8P32881 189 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC7A2P52569 658 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 FMODQ06828 376 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 ALG10Q5BKT4 473 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 ELFN2Q5R3F8 820 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 RBM15BQ8NDT2 890 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 NMD3Q96D46 503 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 FNDC11Q9BVV2 318 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 CDH20Q9HBT6 801 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 STX18Q9P2W9 335 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 LPAR3Q9UBY5 353 aa18.27■□□□□ 0.52
CSNK1D-216ENST00000581108 NPIPB13A6NJU9 1138 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 NPIPB4C9JG80 1138 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 GSTA4O15217 222 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 CCDC22O60826 627 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 CLPTM1O96005 669 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 IFNW1P05000 195 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 NAT2P11245 290 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 COL8A2P25067 703 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 MRPS34P82930 218 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 PLP2Q04941 152 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 TOP3AQ13472 1001 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 TRIP10Q15642 601 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 RGS7BPQ6MZT1 257 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 C8orf82Q6P1X6 216 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 IL17RELQ6ZVW7 336 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 IGFN1Q86VF2 1251 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 TREML1Q86YW5 311 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 NRMQ8IXM6 262 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 CLDN22Q8N7P3 220 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 SPATA3Q8NHX4 192 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 NSMAFQ92636 917 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 SNX18Q96RF0 628 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 HOPXQ9BPY8 73 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 C1orf198Q9H425 327 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 EFCAB1Q9HAE3 211 aa18.26■□□□□ 0.51
CSNK1D-216ENST00000581108 SIAEQ9HAT2 523 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms