RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 EDNRAP25101 427 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 CASP6P55212 293 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 GABARAPL2P60520 117 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 TMED1Q13445 227 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 GUSBP1Q15486 140 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 HIST3H3Q16695 136 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 EIF2S3LQ2VIR3 472 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 PHYHD1Q5SRE7 291 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC25A47Q6Q0C1 308 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 OR51G2Q8NGK0 314 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNRF4Q8WWF5 429 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 IPCEF1Q8WWN9 437 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 GGHQ92820 318 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 MCHR2Q969V1 340 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 LGALS12Q96DT0 336 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 FOXN4Q96NZ1 517 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 CNN2Q99439 309 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 TEAD3Q99594 435 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF696Q9H7X3 374 aa13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 CNOT2Q9NZN8 540 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 COA3Q9Y2R0 106 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-219ENST00000570273 TRGV8A0A0C4DH27 118 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 A0A1W2PPL8 197 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 IRGMA1A4Y4 181 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 TVP23AA6NH52 213 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 GPANK1O95872 356 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 IL2RAP01589 272 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 IGHV3-9P01782 118 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 HLA-DQA2P01906 255 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 GLI4P10075 376 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 PIPP12273 146 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 ATP6V1E1P36543 226 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 POU4F2Q12837 409 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 ETFDHQ16134 617 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 KLHL22Q53GT1 634 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 LINC01590Q5TEZ4 76 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 TSPO2Q5TGU0 170 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 LRFN4Q6PJG9 635 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 SHFQ7M4L6 423 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 STX19Q8N4C7 294 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 OR6K3Q8NGY3 331 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 SGCDQ92629 289 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 ZFP3Q96NJ6 502 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 TTYH2Q9BSA4 534 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 COPS4Q9BT78 406 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 LINC00470Q9BZP3 86 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 CCNB1IP1Q9NPC3 277 aa13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 PAK1IP1Q9NWT1 392 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-219ENST00000570273 PRRC2CQ9Y520 2896 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 MAGEA13PA6NCF6 341 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 EIF4E1BA6NMX2 242 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 DHHO43323 396 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 TOXO94900 526 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 CRHP06850 196 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 TIMP3P35625 211 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 NAA10P41227 235 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC15A1P46059 708 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 OR3A2P47893 321 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF84P51523 738 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF133P52736 654 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 BLVRAP53004 296 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 CDH15P55291 814 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC35A2P78381 396 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 GLO1Q04760 184 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 PIGFQ07326 219 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 RAB40BQ12829 278 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 GGTLC2Q14390 218 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 C10orf128Q5T292 105 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 GLB1L2Q8IW92 636 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 UBE2J2Q8N2K1 259 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 POMGNT2Q8NAT1 580 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF511Q8NB15 262 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 MYDGFQ969H8 173 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 FKBP14Q9NWM8 211 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 HAO2Q9NYQ3 351 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 ERVK-18Q9QC07 812 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 UPB1Q9UBR1 384 aa13.62□□□□□ -0.23
HERPUD1-219ENST00000570273 ZNF587BE7ETH6 402 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 RGS10O43665 173 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 SELENOFO60613 162 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 RAB36O95755 333 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 FADS2O95864 444 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 GAAP10253 952 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 KIR2DL2P43627 348 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 ST3GAL4Q11206 333 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 FOXF2Q12947 444 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 RIPPLY2Q5TAB7 128 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 VWA1Q6PCB0 445 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 ERI1Q8IV48 349 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 OR52I1Q8NGK6 324 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 RBM24Q9BX46 236 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 CCDC90BQ9GZT6 254 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 DUSP21Q9H596 190 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 SEC61A2Q9H9S3 476 aa13.61□□□□□ -0.23
HERPUD1-219ENST00000570273 ADGRL4Q9HBW9 690 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms