RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.77■□□□□ 0.12
COMMD4-222ENST00000568034 TRIP10Q15642 601 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 ETFDHQ16134 617 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 HIKESHIQ53FT3 197 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 THEM4Q5T1C6 240 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 LPCAT4Q643R3 524 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 LEG1Q6P5S2 330 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 MEX3BQ6ZN04 569 aaKnown RBP15.77■□□□□ 0.12
COMMD4-222ENST00000568034 ZBTB49Q6ZSB9 765 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 FOXL2NBQ6ZUU3 175 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 SLC37A3Q8NCC5 494 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 OR52E2Q8NGJ4 325 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 FNDC8Q8TC99 324 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 EME1Q96AY2 570 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 FOXB1Q99853 325 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 SPOCK3Q9BQ16 436 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 SLC17A5Q9NRA2 495 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 CMC2Q9NRP2 79 aa15.77■□□□□ 0.12
COMMD4-222ENST00000568034 H0YHG0 523 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 NR2C1P13056 603 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 TGFBR3Q03167 851 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 CRMP1Q14194 572 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 PTGES3Q15185 160 aaKnown RBP15.76■□□□□ 0.11
COMMD4-222ENST00000568034 TAB1Q15750 504 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 TBRG1Q3YBR2 411 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 OGFRL1Q5TC84 451 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-222ENST00000568034 SP5Q6BEB4 398 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-222ENST00000568034 OR7E24Q6IFN5 339 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 JAZF1Q86VZ6 243 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 C17orf78Q8N4C9 275 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 CYB561A3Q8NBI2 242 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 NSMAFQ92636 917 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 HTRA1Q92743 480 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 NABP1Q96AH0 204 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 TSSK2Q96PF2 358 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 RBP7Q96R05 134 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 MBOAT4Q96T53 435 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 NUAK2Q9H093 628 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 FN3KQ9H479 309 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 TMEM38BQ9NVV0 291 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 CRIM1Q9NZV1 1036 aa15.76■□□□□ 0.11
COMMD4-222ENST00000568034 RRP15Q9Y3B9 282 aaKnown RBP15.76■□□□□ 0.11
COMMD4-222ENST00000568034 ASH1LQ9NR48 2969 aaKnown RBP15.75■□□□□ 0.11
COMMD4-222ENST00000568034 UTP20O75691 2785 aaKnown RBP15.75■□□□□ 0.11
COMMD4-222ENST00000568034 NBPF19A0A087WUL8 3843 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 A0A096LPE4 126 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 A0A1W2PPZ6 126 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 SH3D21A4FU49 640 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 ZNF503-AS2A6NEH8 195 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 TUBAL3A6NHL2 446 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 DLGAP1O14490 977 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 SURF4O15260 269 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 B4GALT1P15291 398 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 PPP3CBP16298 524 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 PEX19P40855 299 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 NPRL3Q12980 569 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 TIMM23BQ5SRD1 257 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 SLX4IPQ5VYV7 408 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 HIST2H2BCQ6DN03 193 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 ANKRD16Q6P6B7 361 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 KLHL24Q6TFL4 600 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 ZNF813Q6ZN06 617 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 OR6V1Q8N148 313 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 DACH2Q96NX9 599 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 USB1Q9BQ65 265 aaKnown RBP15.75■□□□□ 0.11
COMMD4-222ENST00000568034 NMNAT2Q9BZQ4 307 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 RIBC2Q9H4K1 309 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 ZNF224Q9NZL3 707 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 KLHL21Q9UJP4 597 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 SLC25A15Q9Y619 301 aa15.75■□□□□ 0.11
COMMD4-222ENST00000568034 ARPC4-TTLL3A0A0A6YYG9 625 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 A0A1W2PR80 420 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 SLC16A7O60669 478 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 SCG5P05408 212 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 CDAP32320 146 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 KIR2DL3P43628 341 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 SLC34A1Q06495 639 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 LRRC36Q1X8D7 754 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 C12orf73Q69YU5 71 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 ZBTB46Q86UZ6 589 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 P2RY8Q86VZ1 359 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 ZNRF4Q8WWF5 429 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 MED18Q9BUE0 208 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 RPRD1BQ9NQG5 326 aaKnown RBP15.74■□□□□ 0.11
COMMD4-222ENST00000568034 NDRG3Q9UGV2 375 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 ENOPH1Q9UHY7 261 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 B9D1Q9UPM9 204 aa15.74■□□□□ 0.11
COMMD4-222ENST00000568034 SNAP29O95721 258 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 RENP00797 406 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 HMGN1P05114 100 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 ZNF84P51523 738 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 RAD23AP54725 363 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 TUBA1BP68363 451 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 TUBA4AP68366 448 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 MRPS34P82930 218 aaKnown RBP15.73■□□□□ 0.11
COMMD4-222ENST00000568034 RIPK1Q13546 671 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 ZIK1Q3SY52 487 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-222ENST00000568034 NRN1LQ496H8 165 aa15.73■□□□□ 0.11
COMMD4-222ENST00000568034 TUBA1AQ71U36 451 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms