RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 SPATC1Q76KD6 591 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 GALNTL5Q7Z4T8 443 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 GGNQ86UU5 652 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 NR2C2APQ86WQ0 139 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 UEVLDQ8IX04 471 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 SYS1Q8N2H4 156 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 IP6K3Q96PC2 410 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 SMAD5Q99717 465 aaKnown RBP10.12□□□□□ -0.79
LINC00562-201ENST00000566385 LAMP5Q9UJQ1 280 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 UPK3AO75631 287 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 PMS2P2O95744 297 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF17P17021 662 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF43P17038 809 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 ADAM8P78325 824 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 DCTN2Q13561 401 aaKnown RBP10.12□□□□□ -0.79
LINC00562-201ENST00000566385 GPR50Q13585 617 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 CDK5R1Q15078 307 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 LIPNQ5VXI9 398 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 OTOSQ8NHW6 89 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 NEIL3Q8TAT5 605 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF385AQ96PM9 386 aaKnown RBP10.12□□□□□ -0.79
LINC00562-201ENST00000566385 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
LINC00562-201ENST00000566385 CCDC59Q9P031 241 aaKnown RBP10.12□□□□□ -0.79
LINC00562-201ENST00000566385 BSNQ9UPA5 3926 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 TRBV2A0A0J9YWF9 115 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 NPIPB13A6NJU9 1138 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 FAM166BA8MTA8 275 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 NPIPB4C9JG80 1138 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 PROB1E7EW31 1015 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 EIF1AYO14602 144 aaKnown RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 OGG1O15527 345 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SC5DO75845 299 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ABHD16AO95870 558 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SPARCP09486 303 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 PGA4P0DJD7 388 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 PGA3P0DJD8 388 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 MAGEA5P43359 124 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 RPS11P62280 158 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SLC35A1P78382 337 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 HNRNPA0Q13151 305 aaKnown RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 DYNC1I2Q13409 638 aaKnown RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF829Q3KNS6 432 aaPredicted RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 LRRN1Q6UXK5 716 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ABHD4Q8TB40 342 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SLC25A46Q96AG3 418 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ORAI1Q96D31 301 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 KLHL15Q96M94 604 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 OXGR1Q96P68 337 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 MMP27Q9H306 513 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF552Q9H707 407 aaPredicted RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SLCO1C1Q9NYB5 712 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 PLEKHB1Q9UF11 243 aaPredicted RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 A6NIZ1 184 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 H3BSH0 61 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 EDNRAP25101 427 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 FKBP2P26885 142 aaKnown RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 CRABP1P29762 137 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 CASRP41180 1078 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 GDI2P50395 445 aaKnown RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 GBX2P52951 348 aaPredicted RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 GFRA1P56159 465 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 RAP1BP61224 184 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 RAP1AP62834 184 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 GLO1Q04760 184 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 CORO6Q6QEF8 472 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 LINC00346Q8IVM7 164 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ADPRHL1Q8NDY3 354 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SLC26A10Q8NG04 563 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SMIM19Q96E16 107 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SLC25A44Q96H78 314 aaPredicted RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SFXN2Q96NB2 322 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 FAM173AQ9BQD7 235 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 IRF2BPLQ9H1B7 796 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF703Q9H7S9 590 aaPredicted RBP10.11□□□□□ -0.79
LINC00562-201ENST00000566385 IKZF2Q9UKS7 526 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 GSTK1Q9Y2Q3 226 aa10.11□□□□□ -0.79
LINC00562-201ENST00000566385 SMAD9O15198 467 aaKnown RBP10.1□□□□□ -0.79
LINC00562-201ENST00000566385 ZFPL1O95159 310 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 IL1AP01583 271 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 SPINK2P20155 84 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 CALRP27797 417 aaKnown RBP10.1□□□□□ -0.79
LINC00562-201ENST00000566385 CDAP32320 146 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 NTF4P34130 210 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 PTGS2P35354 604 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 SOX6P35712 828 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 CCL11P51671 97 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 CLDN17P56750 224 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 INAQ16352 499 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 ZNF239Q16600 458 aaKnown RBP10.1□□□□□ -0.79
LINC00562-201ENST00000566385 AGAP7PQ5VUJ5 663 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 SYT9Q86SS6 491 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 YIPF7Q8N8F6 280 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 MDS2Q8NDY4 140 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 FDCSPQ8NFU4 85 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 PPP1R14AQ96A00 147 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 AGAP4Q96P64 663 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 FRRS1LQ9P0K9 344 aa10.1□□□□□ -0.79
LINC00562-201ENST00000566385 RTTNQ86VV8 2226 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms