RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RNF212BA8MTL3 300 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 GSTA4O15217 222 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 SLC2A10O95528 541 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 FAM157CP0CG43 387 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 THRBP10828 461 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 COX4I1P13073 169 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 ZNF23P17027 643 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 IGFBP5P24593 272 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 SELENOWP63302 87 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 LIPEQ05469 1076 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 LAPTM4AQ15012 233 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 ARPINQ7Z6K5 226 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 VTCN1Q7Z7D3 282 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 IGFN1Q86VF2 1251 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 RBM15BQ8NDT2 890 aaKnown RBP15.21■□□□□ 0.03
NME3-205ENST00000563854 RP9Q8TA86 221 aaKnown RBP15.21■□□□□ 0.03
NME3-205ENST00000563854 NSMAFQ92636 917 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 SNX18Q96RF0 628 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 CCDC134Q9H6E4 229 aa15.21■□□□□ 0.03
NME3-205ENST00000563854 J3KTA2 159 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 SLC22A2O15244 555 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 IFNW1P05000 195 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 LCKP06239 509 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 SAGP10523 405 aaPredicted RBP15.2■□□□□ 0.02
NME3-205ENST00000563854 CDAP32320 146 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 SLC7A2P52569 658 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 SEC24CP53992 1094 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 HSF2Q03933 536 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 PLP2Q04941 152 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 FMODQ06828 376 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 FXNQ16595 210 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 TBC1D28Q2M2D7 210 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 ALG10Q5BKT4 473 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 RGS7BPQ6MZT1 257 aaPredicted RBP15.2■□□□□ 0.02
NME3-205ENST00000563854 ZNF786Q8N393 782 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 PAQR4Q8N4S7 273 aaPredicted RBP15.2■□□□□ 0.02
NME3-205ENST00000563854 BPIFA2Q96DR5 249 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 FNDC11Q9BVV2 318 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 MRPL13Q9BYD1 178 aaKnown RBP15.2■□□□□ 0.02
NME3-205ENST00000563854 CCNB1IP1Q9NPC3 277 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 LPAR3Q9UBY5 353 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 A4GNTQ9UNA3 340 aa15.2■□□□□ 0.02
NME3-205ENST00000563854 YLPM1P49750 1951 aaKnown RBP15.2■□□□□ 0.02
NME3-205ENST00000563854 FBN1P35555 2871 aaKnown RBP15.19■□□□□ 0.02
NME3-205ENST00000563854 IQCMA0A1B0GVH7 501 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 CXCR6O00574 342 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 TGFAP01135 160 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 IGF2P01344 180 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 NAT2P11245 290 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 FUT4P22083 530 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 CCNOP22674 350 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 APEX1P27695 318 aaKnown RBP15.19■□□□□ 0.02
NME3-205ENST00000563854 MDH1P40925 334 aaKnown RBP15.19■□□□□ 0.02
NME3-205ENST00000563854 EVX1P49640 407 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 CHN2P52757 468 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 CCNIQ14094 377 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 TRIP10Q15642 601 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 HIST3H3Q16695 136 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 NKPD1Q17RQ9 610 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 ARMC4Q5T2S8 1044 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 FKBP9P1Q75LS8 142 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 DPPA2Q7Z7J5 298 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 SLC15A3Q8IY34 581 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 HDAC2Q92769 488 aaKnown RBP15.19■□□□□ 0.02
NME3-205ENST00000563854 SOX7Q9BT81 388 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 KCNN2Q9H2S1 579 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 MS4A5Q9H3V2 200 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 TMEM160Q9NX00 188 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 STX18Q9P2W9 335 aaKnown RBP15.19■□□□□ 0.02
NME3-205ENST00000563854 AP3M1Q9Y2T2 418 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 SNX13Q9Y5W8 968 aa15.19■□□□□ 0.02
NME3-205ENST00000563854 TRAV27A0A087WT01 109 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 NME4O00746 187 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 CCDC22O60826 627 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 PTHP01270 115 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 MAKP20794 623 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 GIFP27352 417 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 IL2RGP31785 369 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 APLNRP35414 380 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 NUDT2P50583 147 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 ERVS71-1P61550 626 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 TRAM2Q15035 370 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 SGCAQ16586 387 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 NRMQ8IXM6 262 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 OR51A7Q8NH64 312 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 LIPHQ8WWY8 451 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 GEMIN6Q8WXD5 167 aaKnown RBP15.18■□□□□ 0.02
NME3-205ENST00000563854 FAM162AQ96A26 154 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 LRMDAQ9H2I8 198 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 TXNIPQ9H3M7 391 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 C1orf198Q9H425 327 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 NARFLQ9H6Q4 476 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 MED4Q9NPJ6 270 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 HIF3AQ9Y2N7 669 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 RTTNQ86VV8 2226 aa15.18■□□□□ 0.02
NME3-205ENST00000563854 IGKV1D-43A0A0B4J1Z2 117 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 SLC22A23A1A5C7 686 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 EFCAB9A8MZ26 197 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 CENPBD1B2RD01 187 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 CLPTM1O96005 669 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms