RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 LYNX1P0DP58 116 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 TROVE2P10155 538 aaKnown RBP eCLIP14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 ZNF250P15622 560 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 ACADSP16219 412 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 ALDH3B1P43353 468 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 SEC24CP53992 1094 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 TMEM33P57088 247 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 CLRN1P58418 232 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 TAS2R41P59536 307 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 PIN1Q13526 163 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 MAPRE2Q15555 327 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 TRIP10Q15642 601 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 PFN4Q8NHR9 129 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 C10orf82Q8WW14 230 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 SNX18Q96RF0 628 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 ZNF347Q96SE7 839 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 INIPQ9NRY2 104 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 C20orf141Q9NUB4 165 aa14.76□□□□□ -0.05
VPS9D1-203ENST00000563798 FAM220BPB1ANY3 271 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 TRMUO75648 421 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 HPXP02790 462 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 F13BP05160 661 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 TNFRSF1BP20333 461 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 KDELR2P33947 212 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 AQP2P41181 271 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 ZNF84P51523 738 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 ARFIP2P53365 341 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 DVL1P1P54792 670 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 MRPS34P82930 218 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 MMEL1Q495T6 779 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 RGS7BPQ6MZT1 257 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 CGB2Q6NT52 195 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 DEF8Q6ZN54 512 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 IL17RELQ6ZVW7 336 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 SLC16A14Q7RTX9 510 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 PAQR4Q8N4S7 273 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 PCYOX1LQ8NBM8 494 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 OR1J2Q8NGS2 313 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 ZNF519Q8TB69 540 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 SIAEQ9HAT2 523 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 GID8Q9NWU2 228 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 DUSP13Q9UII6 198 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 MED31Q9Y3C7 131 aa14.75□□□□□ -0.05
VPS9D1-203ENST00000563798 SLC22A2O15244 555 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 RP2O75695 350 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 COL8A2P25067 703 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 RAD52P43351 418 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 UCP2P55851 309 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 SELENOWP63302 87 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 MAD2L1BPQ15013 274 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 TAF11Q15544 211 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 TBC1D28Q2M2D7 210 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 CYBRD1Q53TN4 286 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 RBM15BQ8NDT2 890 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 MOSPD2Q8NHP6 518 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 BCL2L14Q9BZR8 327 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 RNF121Q9H920 327 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 CDH20Q9HBT6 801 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 SLCO1C1Q9NYB5 712 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 NKIRAS2Q9NYR9 191 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 TMEFF2Q9UIK5 374 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 GPR160Q9UJ42 338 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 HIF3AQ9Y2N7 669 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 UGT2A1Q9Y4X1 527 aa14.74□□□□□ -0.05
VPS9D1-203ENST00000563798 IQCMA0A1B0GVH7 501 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 A0A1W2PPW3 197 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 B4DSR2 109 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 MCIDASD6RGH6 385 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 NCR1O76036 304 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 NR2C1P13056 603 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 TCN1P20061 433 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 PCMT1P22061 227 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 GPR6P46095 362 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 OR1E2P47887 323 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 KLF3P57682 345 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 SELENOVP59797 346 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 PLP2Q04941 152 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 ST3GAL3Q11203 375 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 PCGF3Q3KNV8 242 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 SYT14Q8NB59 555 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 OR2T12Q8NG77 320 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 SYNPRQ8TBG9 265 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 YIPF5Q969M3 257 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 NABP1Q96AH0 204 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 PRRC1Q96M27 445 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 ZNF416Q9BWM5 594 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 LRMDAQ9H2I8 198 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 TXNIPQ9H3M7 391 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 FGFR1OP2Q9NVK5 253 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 FZR1Q9UM11 496 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 A4GNTQ9UNA3 340 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 AP3M1Q9Y2T2 418 aa14.73□□□□□ -0.05
VPS9D1-203ENST00000563798 LOC100653049A0A140TA62 436 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 GMNCA6NCL1 334 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 C17orf100A8MU93 164 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 SHOX2O60902 331 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 KRT34O76011 436 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 CLPTM1O96005 669 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 IGHMP01871 453 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 TFP02787 698 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms