RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 U3KQV3 271 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CACNA1CQ13936 2221 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 POLQO75417 2590 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 VPS13CQ709C8 3753 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 IGKV1D-42A0A075B6H8 117 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 A0A087WUJ7 227 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 A0A0J9YW62 118 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TRBV4-1A0A0J9YWV2 114 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 A0A1W2PPL8 197 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 A0A1W2PRQ8 180 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 GJE1A6NN92 205 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ENO4A6NNW6 628 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 A8MVM7 634 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 H3BNX3 289 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TNFRSF11BO00300 401 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TNFSF11O14788 317 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 BCKDKO14874 412 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ADAMDEC1O15204 470 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 CLOCKO15516 846 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 HNRNPRO43390 633 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PIP5K1CO60331 668 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 GADD45GO95257 159 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 AHSA1O95433 338 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 BAG2O95816 211 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 THRBP10828 461 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 FCGR1AP12314 374 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 CBLP22681 906 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 FASP25445 335 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 IDUAP35475 653 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 RBM34P42696 430 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 AGFG1P52594 562 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 UGT2B15P54855 530 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 OR2B6P58173 313 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 SMIM11AP58511 58 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 RBPJQ06330 500 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 MYBPHQ13203 477 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 DGCR6Q14129 220 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 RCN1Q15293 331 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 SEC23BQ15437 767 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ATP6AP1Q15904 470 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 EXOC3L2Q2M3D2 409 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ACSF3Q4G176 576 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 C1orf185Q5T7R7 199 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 C1orf140Q5VVS0 124 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 SLC18B1Q6NT16 456 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PODNL1Q6PEZ8 512 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TTC33Q6PID6 262 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TBPL2Q6SJ96 375 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 RRM2BQ7LG56 351 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 MEX3DQ86XN8 651 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 NRMQ8IXM6 262 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PNLDC1Q8NA58 520 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 C9orf106Q8NAJ2 232 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 RELL2Q8NC24 303 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PAPD5Q8NDF8 572 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 LILRB4Q8NHJ6 448 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PFN4Q8NHR9 129 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PIGXQ8TBF5 258 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM239Q8WW34 195 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ACOT11Q8WXI4 607 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 LRTOMTQ8WZ04 291 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 SLC38A4Q969I6 547 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 DDIT4LQ96D03 193 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 KTI12Q96EK9 354 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 DAZAP1Q96EP5 407 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 DUS3LQ96G46 650 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF845Q96IR2 970 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 MPP4Q96JB8 637 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ADGRG7Q96K78 797 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 KLHL15Q96M94 604 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 EPYCQ99645 322 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PKP2Q99959 881 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 PRSS27Q9BQR3 290 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 QTRT1Q9BXR0 403 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 SEMA6AQ9H2E6 1030 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TP63Q9H3D4 680 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ZMAT3Q9HA38 289 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 C12orf10Q9HB07 376 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 ARMC1Q9NVT9 282 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 VNN3Q9NY84 501 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 C6orf203Q9P0P8 240 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 DNAJB9Q9UBS3 223 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 RRP15Q9Y3B9 282 aaKnown RBP4.53□□□□□ -1.68
CNOT1-205ENST00000563283 MED31Q9Y3C7 131 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 LYVE1Q9Y5Y7 322 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 AP4B1Q9Y6B7 739 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 MPDZO75970 2070 aa4.53□□□□□ -1.68
CNOT1-205ENST00000563283 TRAV36DV7A0A075B6V5 113 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 A0A087WUU8 490 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 IGHV3-15A0A0B4J1V0 119 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 SH3PXD2BA1X283 911 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 NKX2-6A6NCS4 301 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 MBD3L4A6NDZ8 208 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-205ENST00000563283 MBD3L3A6NE82 208 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-205ENST00000563283 MBD3L5A6NJ08 208 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-205ENST00000563283 CD8B2A6NJW9 211 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 SAC3D1A6NKF1 404 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 CLCA1A8K7I4 914 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 LRRN3E7EW58 273 aa4.52□□□□□ -1.69
CNOT1-205ENST00000563283 SULT2B1O00204 365 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms