RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 HTR3EA5X5Y0 456 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 CXCR6O00574 342 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 GSTA4O15217 222 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 LMX1BO60663 402 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 IFNW1P05000 195 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 IFI30P13284 250 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 ZNF23P17027 643 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 GIFP27352 417 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 YAP1P46937 504 aaKnown RBP11.88□□□□□ -0.51
PCNX4-209ENST00000555569 SLC7A2P52569 658 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 SLC36A2Q495M3 483 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 C10orf128Q5T292 105 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 PODNL1Q6PEZ8 512 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 OFCC1Q8IZS5 231 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 RBM15BQ8NDT2 890 aaKnown RBP11.88□□□□□ -0.51
PCNX4-209ENST00000555569 SLC30A7Q8NEW0 376 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 GEMIN6Q8WXD5 167 aaKnown RBP11.88□□□□□ -0.51
PCNX4-209ENST00000555569 HDAC2Q92769 488 aaKnown RBP11.88□□□□□ -0.51
PCNX4-209ENST00000555569 BPIFA2Q96DR5 249 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
PCNX4-209ENST00000555569 FNDC11Q9BVV2 318 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 TXNIPQ9H3M7 391 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 EFCAB1Q9HAE3 211 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 LPAR3Q9UBY5 353 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 REV1Q9UBZ9 1251 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 FZR1Q9UM11 496 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
PCNX4-209ENST00000555569 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 SLC22A23A1A5C7 686 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 J3KTA2 159 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 NME4O00746 187 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 MGRN1O60291 552 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 SLC2A10O95528 541 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 ZNF682O95780 498 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 PTHP01270 115 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 FAM157CP0CG43 387 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 CD47Q08722 323 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 TOP3AQ13472 1001 aaPredicted RBP11.87□□□□□ -0.51
PCNX4-209ENST00000555569 TRAM2Q15035 370 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 TAF11Q15544 211 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 IFI44LQ53G44 452 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 ALG10Q5BKT4 473 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 FAM166AQ6J272 317 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 C8orf82Q6P1X6 216 aaPredicted RBP11.87□□□□□ -0.51
PCNX4-209ENST00000555569 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 CBLL1Q75N03 491 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 TREML1Q86YW5 311 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 LRRC18Q8N456 261 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 PAQR4Q8N4S7 273 aaPredicted RBP11.87□□□□□ -0.51
PCNX4-209ENST00000555569 MSI2Q96DH6 328 aaKnown RBP11.87□□□□□ -0.51
PCNX4-209ENST00000555569 BEX2Q9BXY8 128 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 KCNN2Q9H2S1 579 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 SMURF2Q9HAU4 748 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 CDH20Q9HBT6 801 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 MAN2C1Q9NTJ4 1040 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 RHCGQ9UBD6 479 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 DUSP13Q9UII6 198 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 KCNS2Q9ULS6 477 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 SNX13Q9Y5W8 968 aa11.87□□□□□ -0.51
PCNX4-209ENST00000555569 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 MMP7P09237 267 aaPredicted RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 TACSTD2P09758 323 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 FAM157BP0CG42 384 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 SAGP10523 405 aaPredicted RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 NR2C1P13056 603 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 CCL2P13500 99 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 MAKP20794 623 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 FUT4P22083 530 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 CDAP32320 146 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 ALDH3B1P43353 468 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 GSK3BP49841 420 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 NUDT2P50583 147 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 SEC24CP53992 1094 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 CTXN1P60606 82 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 RPL27P61353 136 aaKnown RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 MRPS34P82930 218 aaKnown RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 HSF2Q03933 536 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 PLP2Q04941 152 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 RIN1Q13671 783 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 MAD2L1BPQ15013 274 aaPredicted RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 TBC1D28Q2M2D7 210 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 RGS7BPQ6MZT1 257 aaPredicted RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 FKBP9P1Q75LS8 142 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 CXXC5Q7LFL8 322 aaKnown RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 NRMQ8IXM6 262 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 OR1J2Q8NGS2 313 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 NMD3Q96D46 503 aaKnown RBP11.86□□□□□ -0.51
PCNX4-209ENST00000555569 ALG12Q9BV10 488 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 SHARPINQ9H0F6 387 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 LRMDAQ9H2I8 198 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 SIAEQ9HAT2 523 aa11.86□□□□□ -0.51
PCNX4-209ENST00000555569 MYEF2Q9P2K5 600 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms