RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 LEG1Q6P5S2 330 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 PQLC1Q8N2U9 271 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 OR52E2Q8NGJ4 325 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 OR8D4Q8NGM9 314 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 PIK3IP1Q96FE7 263 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 OSBPL10Q9BXB5 764 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 GABARAPL1Q9H0R8 117 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 SYT4Q9H2B2 425 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 RERGLQ9H628 205 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
TUBB3-202ENST00000553656 TMEM38BQ9NVV0 291 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 SLC25A15Q9Y619 301 aa12.13□□□□□ -0.47
TUBB3-202ENST00000553656 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 A0A1W2PPL8 197 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 RIIAD1A6NNX1 92 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 BHLHE40O14503 412 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 HIST1H1CP16403 213 aaKnown RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 NPR2P20594 1047 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 IGFBP5P24593 272 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 CRABP1P29762 137 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 ZNF133P52736 654 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 PGGHGQ32M88 737 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 NRN1LQ496H8 165 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 SLC27A4Q6P1M0 643 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 SLC25A47Q6Q0C1 308 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 C22orf34Q6ZV56 151 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 ZNF627Q7L945 461 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 PARP8Q8N3A8 854 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 LNX2Q8N448 690 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 SLC22A24Q8N4F4 322 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 SDR9C7Q8NEX9 313 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 NMD3Q96D46 503 aaKnown RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 SNX18Q96RF0 628 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 NMNAT3Q96T66 252 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 RBM4BQ9BQ04 359 aaKnown RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 RBM4Q9BWF3 364 aaKnown RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 KCNN2Q9H2S1 579 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 SEC61A2Q9H9S3 476 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-202ENST00000553656 REV1Q9UBZ9 1251 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 KLHL21Q9UJP4 597 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 ORC6Q9Y5N6 252 aa12.12□□□□□ -0.47
TUBB3-202ENST00000553656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
TUBB3-202ENST00000553656 M0R1B8 84 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 MGRN1O60291 552 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 SLC16A7O60669 478 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 KHDRBS3O75525 346 aaKnown RBP12.11□□□□□ -0.47
TUBB3-202ENST00000553656 UBL3O95164 117 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 CD79AP11912 226 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 ZNF3P17036 446 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 GRK5P34947 590 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
TUBB3-202ENST00000553656 CENPAP49450 140 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 DAPP51397 102 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 ZNF83P51522 516 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 TUBA1BP68363 451 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 TUBA4AP68366 448 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 GINS1Q14691 196 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 SGCAQ16586 387 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 TMEM108Q6UXF1 575 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 TUBA1AQ71U36 451 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
TUBB3-202ENST00000553656 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 ZNF295-AS1Q8N0V1 137 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 OR4Q3Q8NH05 313 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 PRRG3Q9BZD7 231 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
TUBB3-202ENST00000553656 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 PKDREJQ9NTG1 2253 aa12.11□□□□□ -0.47
TUBB3-202ENST00000553656 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 CTAG2O75638 210 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 HLA-HP01893 362 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
TUBB3-202ENST00000553656 HMGN1P05114 100 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 CD3EP07766 207 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 CTLA4P16410 223 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 CDAP32320 146 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 ESRRGP62508 458 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 MRPS34P82930 218 aaKnown RBP12.1□□□□□ -0.47
TUBB3-202ENST00000553656 RCN1Q15293 331 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 GSG1Q2KHT4 349 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 SLC36A2Q495M3 483 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 KDM4DQ6B0I6 523 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 SLC16A14Q7RTX9 510 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 IQCF1Q8N6M8 205 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 SLC38A2Q96QD8 506 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 CIB1Q99828 191 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 KCNS3Q9BQ31 491 aa12.1□□□□□ -0.47
TUBB3-202ENST00000553656 C9orf16Q9BUW7 83 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms