RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATF1-202ENST00000549612 MGRN1O60291 552 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 PIP5K1CO60331 668 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 LMX1BO60663 402 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 COX4I1P13073 169 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 MDH1P40925 334 aaKnown RBP16.79■□□□□ 0.28
ATF1-202ENST00000549612 SLC36A2Q495M3 483 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 FAM166AQ6J272 317 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 SLC16A14Q7RTX9 510 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 OFCC1Q8IZS5 231 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 UBASH3BQ8TF42 649 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 NMD3Q96D46 503 aaKnown RBP16.79■□□□□ 0.28
ATF1-202ENST00000549612 SYT3Q9BQG1 590 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 TXNIPQ9H3M7 391 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 TPK1Q9H3S4 243 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 MS4A5Q9H3V2 200 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 SMURF2Q9HAU4 748 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 MAN2C1Q9NTJ4 1040 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 GMPR2Q9P2T1 348 aaKnown RBP16.79■□□□□ 0.28
ATF1-202ENST00000549612 REV1Q9UBZ9 1251 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 MALRD1Q5VYJ5 2156 aa16.79■□□□□ 0.28
ATF1-202ENST00000549612 SLC22A23A1A5C7 686 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 CCDC22O60826 627 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 SNAP29O95721 258 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 IFNW1P05000 195 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 TACSTD2P09758 323 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 IFNA8P32881 189 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 MRPS34P82930 218 aaKnown RBP16.78■□□□□ 0.28
ATF1-202ENST00000549612 LIPEQ05469 1076 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 RIN1Q13671 783 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 LAPTM4AQ15012 233 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 TAF11Q15544 211 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 C8orf82Q6P1X6 216 aaPredicted RBP16.78■□□□□ 0.28
ATF1-202ENST00000549612 VTCN1Q7Z7D3 282 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 LRP11Q86VZ4 500 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 PAQR4Q8N4S7 273 aaPredicted RBP16.78■□□□□ 0.28
ATF1-202ENST00000549612 BPIFA2Q96DR5 249 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 HOPXQ9BPY8 73 aaPredicted RBP16.78■□□□□ 0.28
ATF1-202ENST00000549612 BEX2Q9BXY8 128 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 KCNS2Q9ULS6 477 aa16.78■□□□□ 0.28
ATF1-202ENST00000549612 LOC100289279A0A1B0GTE1 492 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 NME4O00746 187 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 IGHMP01871 453 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 MMP7P09237 267 aaPredicted RBP16.77■□□□□ 0.28
ATF1-202ENST00000549612 NR2C1P13056 603 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 IFI30P13284 250 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 FUT4P22083 530 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 IGFBP5P24593 272 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 ALDH3B1P43353 468 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 SLC7A2P52569 658 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 ALG10Q5BKT4 473 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 HACD2Q6Y1H2 254 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 RBM15BQ8NDT2 890 aaKnown RBP16.77■□□□□ 0.28
ATF1-202ENST00000549612 SPATA3Q8NHX4 192 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 GEMIN6Q8WXD5 167 aaKnown RBP16.77■□□□□ 0.28
ATF1-202ENST00000549612 HDAC2Q92769 488 aaKnown RBP16.77■□□□□ 0.28
ATF1-202ENST00000549612 SHARPINQ9H0F6 387 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 RNF121Q9H920 327 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 SIAEQ9HAT2 523 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 MYEF2Q9P2K5 600 aaKnown RBP16.77■□□□□ 0.28
ATF1-202ENST00000549612 UGT2A1Q9Y4X1 527 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 SNX13Q9Y5W8 968 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 SVEP1Q4LDE5 3571 aa16.77■□□□□ 0.28
ATF1-202ENST00000549612 CXCR6O00574 342 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 FFAR1O14842 300 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 LILRA1O75019 489 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 SLC2A10O95528 541 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 PTHP01270 115 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 CHN2P52757 468 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 TRAM2Q15035 370 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 TBC1D28Q2M2D7 210 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 RGS7BPQ6MZT1 257 aaPredicted RBP16.76■□□□□ 0.27
ATF1-202ENST00000549612 CBLL1Q75N03 491 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 TREML1Q86YW5 311 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 NRMQ8IXM6 262 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 OR1J2Q8NGS2 313 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 HPS1Q92902 700 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 NABP1Q96AH0 204 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 SOX7Q9BT81 388 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 ALG12Q9BV10 488 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 FNDC11Q9BVV2 318 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 CDH20Q9HBT6 801 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 ZNF346Q9UL40 294 aaKnown RBP16.76■□□□□ 0.27
ATF1-202ENST00000549612 FZR1Q9UM11 496 aa16.76■□□□□ 0.27
ATF1-202ENST00000549612 IGKV1D-43A0A0B4J1Z2 117 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 LRP5LA4QPB2 252 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 GMNCA6NCL1 334 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 J3KTA2 159 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 ZNF682O95780 498 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 CCL2P13500 99 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 MAKP20794 623 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 YAP1P46937 504 aaKnown RBP16.75■□□□□ 0.27
ATF1-202ENST00000549612 GSK3BP49841 420 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 SEC24CP53992 1094 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 RPL27P61353 136 aaKnown RBP16.75■□□□□ 0.27
ATF1-202ENST00000549612 PLP2Q04941 152 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 PRKCDQ05655 676 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 FMODQ06828 376 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 FHL1Q13642 323 aa16.75■□□□□ 0.27
ATF1-202ENST00000549612 MAD2L1BPQ15013 274 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms