RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 INIPQ9NRY2 104 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 SPEF1Q9Y4P9 236 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 STAB1Q9NY15 2570 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 IGKV1D-43A0A0B4J1Z2 117 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 LOC100289279A0A1B0GTE1 492 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 ELOVL7A1L3X0 281 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 SLC22A2O15244 555 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 LILRA1O75019 489 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 FARS2O95363 451 aaKnown RBP18.14■□□□□ 0.49
SCARB1-210ENST00000545493 TACSTD2P09758 323 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 CCL2P13500 99 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 ACADSP16219 412 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 SEC24CP53992 1094 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 FMODQ06828 376 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 TRIP10Q15642 601 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 SLC16A14Q7RTX9 510 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 SPATA3Q8NHX4 192 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 UBASH3BQ8TF42 649 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 HDAC2Q92769 488 aaKnown RBP18.14■□□□□ 0.49
SCARB1-210ENST00000545493 TPD52L3Q96J77 140 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 BEX2Q9BXY8 128 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 SHARPINQ9H0F6 387 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 MAN2C1Q9NTJ4 1040 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 HIF3AQ9Y2N7 669 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 MED31Q9Y3C7 131 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 UGT2A1Q9Y4X1 527 aa18.14■□□□□ 0.49
SCARB1-210ENST00000545493 NPIPB13A6NJU9 1138 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 NPIPB4C9JG80 1138 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 ENTPD5O75356 428 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 MMP7P09237 267 aaPredicted RBP18.13■□□□□ 0.49
SCARB1-210ENST00000545493 SELENOWP63302 87 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 ELFN2Q5R3F8 820 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 TMEM53Q6P2H8 277 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 HDDC2Q7Z4H3 204 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 VTCN1Q7Z7D3 282 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 PHC2Q8IXK0 858 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 NABP1Q96AH0 204 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 REV1Q9UBZ9 1251 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 FBN3Q75N90 2809 aa18.13■□□□□ 0.49
SCARB1-210ENST00000545493 J3KTA2 159 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 NCR1O76036 304 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 HPXP02790 462 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 FAM157BP0CG42 384 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 TCN1P20061 433 aaPredicted RBP18.12■□□□□ 0.49
SCARB1-210ENST00000545493 LSP1P33241 339 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 ZNF84P51523 738 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 CHN2P52757 468 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 ERVS71-1P61550 626 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 SLC36A2Q495M3 483 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 ARPINQ7Z6K5 226 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 DPPA2Q7Z7J5 298 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 SLC15A3Q8IY34 581 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 OFCC1Q8IZS5 231 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 SNX18Q96RF0 628 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 OR51B6Q9H340 312 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 SNX13Q9Y5W8 968 aa18.12■□□□□ 0.49
SCARB1-210ENST00000545493 RNF212BA8MTL3 300 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 NME4O00746 187 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 PHF1O43189 567 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 SNAP29O95721 258 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 IFI30P13284 250 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 YAP1P46937 504 aaKnown RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 ST3GAL3Q11203 375 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 TOP3AQ13472 1001 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 ALG10Q5BKT4 473 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 FAM120AOSQ5T036 256 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 RGS7BPQ6MZT1 257 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 C8orf82Q6P1X6 216 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 MEX3DQ86XN8 651 aaKnown RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 LRRC18Q8N456 261 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 RBM15BQ8NDT2 890 aaKnown RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 RP9Q8TA86 221 aaKnown RBP18.11■□□□□ 0.49
SCARB1-210ENST00000545493 TSPAN32Q96QS1 320 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 TXNIPQ9H3M7 391 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 C1orf198Q9H425 327 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 RNF121Q9H920 327 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 CDH20Q9HBT6 801 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 RHCGQ9UBD6 479 aa18.11■□□□□ 0.49
SCARB1-210ENST00000545493 A0A1W2PPW3 197 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 CLPTM1O96005 669 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 IGHMP01871 453 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 NAT2P11245 290 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 COX4I1P13073 169 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 MAKP20794 623 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 APEX1P27695 318 aaKnown RBP18.1■□□□□ 0.49
SCARB1-210ENST00000545493 CDAP32320 146 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 SLC7A2P52569 658 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 LIPEQ05469 1076 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 LAPTM4AQ15012 233 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 TBC1D28Q2M2D7 210 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 ALKBH6Q3KRA9 238 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 IGFN1Q86VF2 1251 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 TREML1Q86YW5 311 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 NRMQ8IXM6 262 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 CLDN22Q8N7P3 220 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 LRRC75AQ8NAA5 344 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 BPIFA2Q96DR5 249 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 MS4A5Q9H3V2 200 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 SMURF2Q9HAU4 748 aa18.1■□□□□ 0.49
SCARB1-210ENST00000545493 STX18Q9P2W9 335 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms