RNA–Protein interactions for RNA: ENST00000544733.5

MAP3K4-216, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 3

Gene MAP3K4, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-216	ENST00000544733	HDDC2	Q7Z4H3	204 aa		11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	OR51A7	Q8NH64	312 aa		11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	NSMAF	Q92636	917 aa		11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	HDAC2	Q92769	488 aa	Known RBP	11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	DOK1	Q99704	481 aa		11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MRPL13	Q9BYD1	178 aa	Known RBP	11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MRPL37	Q9BZE1	423 aa	Known RBP	11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733	EGFL7	Q9UHF1	273 aa		11.18	□□□□□ -0.62
MAP3K4-216	ENST00000544733		A8MV72	311 aa	Predicted RBP	11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ATP8B1	O43520	1251 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ENTPD5	O75356	428 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SERPINA5	P05154	406 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ERCC1	P07992	297 aa	Predicted RBP	11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	FAM157B	P0CG42	384 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	DAO	P14920	347 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ZNF16	P17020	682 aa	Predicted RBP	11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	DRD4	P21917	467 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	NR4A2	P43354	598 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	GPR4	P46093	362 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	GYS2	P54840	703 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CTXN1	P60606	82 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	HIST3H3	Q16695	136 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SLC36A2	Q495M3	483 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	IQCC	Q4KMZ1	466 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	C6orf52	Q5T4I8	152 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	TBPL2	Q6SJ96	375 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ZNF730	Q6ZMV8	503 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CPLX4	Q7Z7G2	160 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	LRP11	Q86VZ4	500 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	RNF148	Q8N7C7	305 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CLDN22	Q8N7P3	220 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SLC30A7	Q8NEW0	376 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	OR13C2	Q8NGS9	318 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	LIPH	Q8WWY8	451 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MRPL24	Q96A35	216 aa	Known RBP	11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CMTM5	Q96DZ9	223 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	NSRP1	Q9H0G5	558 aa	Known RBP	11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MYLK2	Q9H1R3	596 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	TXNIP	Q9H3M7	391 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CDH20	Q9HBT6	801 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ADA2	Q9NZK5	511 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	FBXL3	Q9UKT7	428 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	HIF3A	Q9Y2N7	669 aa		11.17	□□□□□ -0.62
MAP3K4-216	ENST00000544733	IGKV1D-43	A0A0B4J1Z2	117 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	LOC390937	A0A1W2PQ73	354 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	EFCAB9	A8MZ26	197 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	VWC2L	B2RUY7	222 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	LYNX1	G3V0Z9	82 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	TSPAN19	P0C672	248 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	IGHV4-31	P0DP07	118 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	LYNX1	P0DP58	116 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	TCN1	P20061	433 aa	Predicted RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	GLRX	P35754	106 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ALDH3B1	P43353	468 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	RPL27	P61353	136 aa	Known RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	RPS23	P62266	143 aa	Known RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	VLDLR	P98155	873 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	PRKCD	Q05655	676 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SGCA	Q16586	387 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ALKBH6	Q3KRA9	238 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CYP4Z1	Q86W10	505 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ICA1L	Q8NDH6	482 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	TSPAN32	Q96QS1	320 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SEPHS2	Q99611	448 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	BPESC1	Q9GZL8	116 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	MYEF2	Q9P2K5	600 aa	Known RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	STX18	Q9P2W9	335 aa	Known RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ABCD2	Q9UBJ2	740 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SLC7A8	Q9UHI5	535 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	DUSP13	Q9UII6	198 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ZNF346	Q9UL40	294 aa	Known RBP	11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733		V9GYQ6	96 aa		11.16	□□□□□ -0.62
MAP3K4-216	ENST00000544733	FBN1	P35555	2871 aa	Known RBP	11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733		A0A087WUU8	490 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	IGHV4-61	A0A0C4DH41	118 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	IQCM	A0A1B0GVH7	501 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733		A0A1W2PPW3	197 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CENPBD1	B2RD01	187 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733		H7C1C5	153 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733		M0R233	179 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	NDUFS8	O00217	210 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	NDUFAB1	O14561	156 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SYNGR3	O43761	229 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	SNX3	O60493	162 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	PRSS23	O95084	383 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	STAMBP	O95630	424 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	IGFBP1	P08833	259 aa	Predicted RBP	11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	APEH	P13798	732 aa	Known RBP	11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	CCNO	P22674	350 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	APEX1	P27695	318 aa	Known RBP	11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ERVS71-1	P61550	626 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	LCN6	P62502	163 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	ERVK-25	P63136	954 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	GNGT1	P63211	74 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	HSF2	Q03933	536 aa		11.15	□□□□□ -0.62
MAP3K4-216	ENST00000544733	PLP2	Q04941	152 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms