RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ZNF593O00488 134 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SEC14L5O43304 696 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RGS9O75916 674 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RPP14O95059 124 aaKnown RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 HLA-DQA2P01906 255 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PGA4P0DJD7 388 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PGA3P0DJD8 388 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 GDI2P50395 445 aaKnown RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RAP1BP61224 184 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ACTA2P62736 377 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RAP1AP62834 184 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ACTG2P63267 376 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SIRPAP78324 504 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC35A1P78382 337 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 HNRNPA0Q13151 305 aaKnown RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 DCTN2Q13561 401 aaKnown RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 GPR50Q13585 617 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 IGF2-ASQ6U949 168 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SPATC1Q76KD6 591 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 UBQLNLQ8IYU4 475 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 CLEC1AQ8NC01 280 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ABHD4Q8TB40 342 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RPS4Y2Q8TD47 263 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RGP1Q92546 391 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ADGRG7Q96K78 797 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 KLHL15Q96M94 604 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 KCTD7Q96MP8 289 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 OXGR1Q96P68 337 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 IP6K3Q96PC2 410 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PDCD1LG2Q9BQ51 273 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PIGQQ9BRB3 760 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 RNF32Q9H0A6 362 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF703Q9H7S9 590 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PLGRKTQ9HBL7 147 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PLEKHB1Q9UF11 243 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 TEKT2Q9UIF3 430 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PCDHGB7Q9Y5F8 929 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 AKAP13Q12802 2813 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SC5DO75845 299 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SPARCP09486 303 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 EDNRAP25101 427 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 GBX2P52951 348 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 GFRA1P56159 465 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 CLN3Q13286 438 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PHYHD1Q5SRE7 291 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 PLXDC2Q6UX71 529 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC26A10Q8NG04 563 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 OTOSQ8NHW6 89 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 THEM6Q8WUY1 208 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC25A46Q96AG3 418 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ORAI1Q96D31 301 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 MAP6Q96JE9 813 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 SFXN2Q96NB2 322 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF385AQ96PM9 386 aaKnown RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 FAM173AQ9BQD7 235 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 MMP27Q9H306 513 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF552Q9H707 407 aaPredicted RBP10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 LAMP5Q9UJQ1 280 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 CACNA1CQ13936 2221 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 A0A1W2PPK0 400 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 SMAD9O15198 467 aaKnown RBP10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 IL1AP01583 271 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 HLA-DPB1P04440 258 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 SPINK2P20155 84 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 CASRP41180 1078 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 CLDN17P56750 224 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 ADAM8P78325 824 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 IFITM3Q01628 133 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 HSF2Q03933 536 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 INAQ16352 499 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF829Q3KNS6 432 aaPredicted RBP10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 LIPNQ5VXI9 398 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 TMEM225Q6GV28 225 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 LRRN1Q6UXK5 716 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 LINC00346Q8IVM7 164 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 NOXO1Q8NFA2 376 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 NEIL3Q8TAT5 605 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF775Q96BV0 537 aaPredicted RBP10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 SMIM19Q96E16 107 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 SMAD5Q99717 465 aaKnown RBP10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 TTTY12Q9BZ98 90 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 SMURF1Q9HCE7 757 aa10.92□□□□□ -0.66
AP003559.1-201ENST00000540906 TRBV2A0A0J9YWF9 115 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CLDN25C9JDP6 229 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ITGB2P05107 769 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 NTF4P34130 210 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 MAGEA5P43359 124 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 TAS2R43P59537 309 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 RPL22L1Q6P5R6 122 aaKnown RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 LRFN4Q6PJG9 635 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC25A47Q6Q0C1 308 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CORO6Q6QEF8 472 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 TRILQ7L0X0 811 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CEACAM19Q7Z692 300 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 SYT9Q86SS6 491 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 YIPF7Q8N8F6 280 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ZIC4Q8N9L1 334 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 C11orf40Q8WZ69 217 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms