RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ACADSP16219 412 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 IFNA8P32881 189 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 ALDH3B1P43353 468 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 ST3GAL3Q11203 375 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 HSP90B2PQ58FF3 399 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 C10orf128Q5T292 105 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 SPATA3Q8NHX4 192 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 LZICQ8WZA0 190 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 CDH20Q9HBT6 801 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 CMTM6Q9NX76 183 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 FZR1Q9UM11 496 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 A4GNTQ9UNA3 340 aa19.09■□□□□ 0.65
SCARB1-206ENST00000539320 CUBNO60494 3623 aa19.08■□□□□ 0.65
SCARB1-206ENST00000539320 A0A1W2PPW3 197 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 LRP5LA4QPB2 252 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 RNF212BA8MTL3 300 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 TACSTD2P09758 323 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 ZNF133P52736 654 aaPredicted RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 CHN2P52757 468 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 SELENOWP63302 87 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 MAD2L1BPQ15013 274 aaPredicted RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 ARMC4Q5T2S8 1044 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 LRP11Q86VZ4 500 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 ARIH2OSQ8N7S6 290 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 RBM15BQ8NDT2 890 aaKnown RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 RP9Q8TA86 221 aaKnown RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 MS4A5Q9H3V2 200 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 MYEF2Q9P2K5 600 aaKnown RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 GMPR2Q9P2T1 348 aaKnown RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 HIF3AQ9Y2N7 669 aa19.08■□□□□ 0.64
SCARB1-206ENST00000539320 FBN1P35555 2871 aaKnown RBP19.08■□□□□ 0.64
SCARB1-206ENST00000539320 SLC22A23A1A5C7 686 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 SLC2A10O95528 541 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 NR2C1P13056 603 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 IFI30P13284 250 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 CD47Q08722 323 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 TOP3AQ13472 1001 aaPredicted RBP19.07■□□□□ 0.64
SCARB1-206ENST00000539320 RIN1Q13671 783 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 TBC1D28Q2M2D7 210 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 ALG10Q5BKT4 473 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 RGS7BPQ6MZT1 257 aaPredicted RBP19.07■□□□□ 0.64
SCARB1-206ENST00000539320 OFCC1Q8IZS5 231 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 PAQR4Q8N4S7 273 aaPredicted RBP19.07■□□□□ 0.64
SCARB1-206ENST00000539320 HDAC2Q92769 488 aaKnown RBP19.07■□□□□ 0.64
SCARB1-206ENST00000539320 TXNIPQ9H3M7 391 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 SMURF2Q9HAU4 748 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 ZNF346Q9UL40 294 aaKnown RBP19.07■□□□□ 0.64
SCARB1-206ENST00000539320 MXRA5Q9NR99 2828 aa19.07■□□□□ 0.64
SCARB1-206ENST00000539320 IQCMA0A1B0GVH7 501 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 HTR3EA5X5Y0 456 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 LYNX1G3V0Z9 82 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 MGRN1O60291 552 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 LILRA1O75019 489 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 SNAP29O95721 258 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 PTHP01270 115 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 IFNW1P05000 195 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 FAM157BP0CG42 384 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 LYNX1P0DP58 116 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 COX4I1P13073 169 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 TCN1P20061 433 aaPredicted RBP19.06■□□□□ 0.64
SCARB1-206ENST00000539320 APEX1P27695 318 aaKnown RBP19.06■□□□□ 0.64
SCARB1-206ENST00000539320 SEC24CP53992 1094 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 PLP2Q04941 152 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 LIPEQ05469 1076 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 VTCN1Q7Z7D3 282 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 SLC15A3Q8IY34 581 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 OR1J2Q8NGS2 313 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 HPS1Q92902 700 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 NMD3Q96D46 503 aaKnown RBP19.06■□□□□ 0.64
SCARB1-206ENST00000539320 BPIFA2Q96DR5 249 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 SNX18Q96RF0 628 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 SOX7Q9BT81 388 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 DUSP13Q9UII6 198 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 UGT2A1Q9Y4X1 527 aa19.06■□□□□ 0.64
SCARB1-206ENST00000539320 GMNCA6NCL1 334 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 TGFAP01135 160 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 MMP7P09237 267 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-206ENST00000539320 CCL2P13500 99 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 SRD5A1P18405 259 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 HNF1AP20823 631 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 SLC7A2P52569 658 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 MRPS34P82930 218 aaKnown RBP19.05■□□□□ 0.64
SCARB1-206ENST00000539320 HSF2Q03933 536 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 FMODQ06828 376 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 LAPTM4AQ15012 233 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 TAF11Q15544 211 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 ELFN2Q5R3F8 820 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 FAM120AOSQ5T036 256 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 LRRC18Q8N456 261 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 GEMIN6Q8WXD5 167 aaKnown RBP19.05■□□□□ 0.64
SCARB1-206ENST00000539320 ALG12Q9BV10 488 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 LRMDAQ9H2I8 198 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 OR51B6Q9H340 312 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 MAN2C1Q9NTJ4 1040 aa19.05■□□□□ 0.64
SCARB1-206ENST00000539320 CXCR6O00574 342 aa19.04■□□□□ 0.64
SCARB1-206ENST00000539320 CCDC22O60826 627 aa19.04■□□□□ 0.64
SCARB1-206ENST00000539320 ZNF682O95780 498 aa19.04■□□□□ 0.64
SCARB1-206ENST00000539320 IGHMP01871 453 aa19.04■□□□□ 0.64
SCARB1-206ENST00000539320 HPXP02790 462 aa19.04■□□□□ 0.64
SCARB1-206ENST00000539320 SAGP10523 405 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms