RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ESPNLQ6ZVH7 1005 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 SYS1Q8N2H4 156 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 B3GNT3Q9Y2A9 372 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 SVILO95425 2214 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 CCDC187A0A096LP49 1063 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 IGLV3-32A0A0A0MS00 114 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 FABP12A6NFH5 140 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 TAF4O00268 1085 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 ZNF208O43345 1280 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 PNPP00491 289 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 LIFP15018 202 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 ZNF12P17014 697 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 MSX1P28360 303 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 P2RY4P51582 365 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 CLDN12P56749 244 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 TMEM225Q6GV28 225 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 CNIH2Q6PI25 160 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 LINC00696Q6ZRV3 163 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 COX4I2Q96KJ9 171 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 MED18Q9BUE0 208 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 ANGPTL4Q9BY76 406 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 MROQ9BYG7 248 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 KCNN2Q9H2S1 579 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 ELOVL3Q9HB03 270 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 POLHQ9Y253 713 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 A0A0G2JK05 382 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 TRABD2BA6NFA1 517 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 SULT2B1O00204 365 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 SEC14L5O43304 696 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 CLDN20P56880 219 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 GPR50Q13585 617 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 DNAAF1Q8NEP3 725 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 OR5H6Q8NGV6 325 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 OTOSQ8NHW6 89 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 MAP6Q96JE9 813 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 DDA1Q9BW61 102 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 CPNE5Q9HCH3 593 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 STMN3Q9NZ72 180 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 DKKL1Q9UK85 242 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 FKBP7Q9Y680 259 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 ATMQ13315 3056 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 A6NL46 340 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 ENPP1P22413 925 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 TAS2R43P59537 309 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 DDI2Q5TDH0 399 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 STPG1Q5TH74 334 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 RPL22L1Q6P5R6 122 aaKnown RBP12.62□□□□□ -0.39
ACTN1-205ENST00000538545 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 PRSS35Q8N3Z0 413 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 KLHL15Q96M94 604 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 ALKBH4Q9NXW9 302 aa12.62□□□□□ -0.39
ACTN1-205ENST00000538545 VSX1Q9NZR4 365 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-205ENST00000538545 ETV2O00321 342 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 TNFSF11O14788 317 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 KRT8P05787 483 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SNRPBP14678 240 aaKnown RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 MFGE8Q08431 387 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 EIF2B1Q14232 305 aaKnown RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SLC25A53Q5H9E4 307 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 TIGD3Q6B0B8 471 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 IL22RA1Q8N6P7 574 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 FRMD6Q96NE9 622 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SIGLEC12Q96PQ1 595 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SRRQ9GZT4 340 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 FAIMQ9NVQ4 179 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 TMCC2O75069 709 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 ELK1P19419 428 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SDHBP21912 280 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 THBS2P35442 1172 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 TCF15Q12870 199 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 ABHD6Q9BV23 337 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 N6AMT1Q9Y5N5 214 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 FAM25AB3EWG3 89 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 FAM25CB3EWG5 89 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 FAM25GB3EWG6 89 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 CYC1P08574 325 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 ATF1P18846 271 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 MYL9P24844 172 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 ITGA3P26006 1051 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 CD97P48960 835 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 WIPI1Q5MNZ9 446 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-205ENST00000538545 FAM220AQ7Z4H9 259 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 NEDD4LQ96PU5 975 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 GFI1Q99684 422 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 NDEL1Q9GZM8 345 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 SEC61A2Q9H9S3 476 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 EMC7Q9NPA0 242 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
ACTN1-205ENST00000538545 A0A1W2PQ09 198 aa12.6□□□□□ -0.39
ACTN1-205ENST00000538545 SNPHO15079 494 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms