RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TMEM5Q9Y2B1 443 aa14.88□□□□□ -0.03
SFSWAP-205ENST00000537164 FAM32AQ9Y421 112 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-205ENST00000537164 CHD3Q12873 2000 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-205ENST00000537164 FN1P02751 2386 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 TRAV27A0A087WT01 109 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 FARS2O95363 451 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 RAB36O95755 333 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 SERPINA5P05154 406 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 OR4A8P0C604 315 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 ITGA2P17301 1181 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 TCN1P20061 433 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 PTDSS1P48651 473 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 ZNF84P51523 738 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 EFNA4P52798 201 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 NUDT6P53370 316 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 DSCR9P59020 149 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 MRPS34P82930 218 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 THEM4Q5T1C6 240 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 GKAP1Q5VSY0 366 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 PODNL1Q6PEZ8 512 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 RRM2BQ7LG56 351 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 DEFB107AQ8IZN7 70 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 OR4K5Q8NGD3 323 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 OR51A7Q8NH64 312 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 REG4Q9BYZ8 158 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 ZNF346Q9UL40 294 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 UGT2A1Q9Y4X1 527 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 HIVEP2P31629 2446 aa14.87□□□□□ -0.03
SFSWAP-205ENST00000537164 VSTM5A8MXK1 200 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 SMAD7O15105 426 aaKnown RBP14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 ARPC2O15144 300 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 SSX4O60224 188 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 F12P00748 615 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 ZNF26P17031 533 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 NPR2P20594 1047 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 THBS4P35443 961 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 LIMS1P48059 325 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 PPOXP50336 477 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 CTXN1P60606 82 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 SNRPD2P62316 118 aaKnown RBP14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 MYBPC1Q00872 1141 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 DAG1Q14118 895 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 ZBED5Q49AG3 693 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 SLC25A47Q6Q0C1 308 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 OR13C2Q8NGS9 318 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 NABP1Q96AH0 204 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 NSMCE2Q96MF7 247 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 TSPAN32Q96QS1 320 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 SH3GL3Q99963 347 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 SIAEQ9HAT2 523 aa14.86□□□□□ -0.03
SFSWAP-205ENST00000537164 YLPM1P49750 1951 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 RTTNQ86VV8 2226 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 A0A096LNT2 108 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 IGKV1D-43A0A0B4J1Z2 117 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 TMEM129A0AVI4 362 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 A6NIZ1 184 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 RNF223E7ERA6 249 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 PTP4A3O75365 173 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 SLC2A10O95528 541 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 MMP7P09237 267 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 PATE4P0C8F1 98 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 HOXB4P17483 251 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 MSX2P35548 267 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 GLRXP35754 106 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 GPR4P46093 362 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 OMPP47874 163 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 EVX1P49640 407 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 RAP1BP61224 184 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 RAP1AP62834 184 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 SNTB2Q13425 540 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 RAB39AQ14964 217 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 SLC36A2Q495M3 483 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 FOXL2NBQ6ZUU3 175 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 FAM122BQ7Z309 247 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 MEX3DQ86XN8 651 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 ARHGAP24Q8N264 748 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 ARIH2OSQ8N7S6 290 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 NSL1Q96IY1 281 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 GPX7Q96SL4 187 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 DOK1Q99704 481 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 RHNO1Q9BSD3 238 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 C1orf198Q9H425 327 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 SIGLEC7Q9Y286 467 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 SPEF1Q9Y4P9 236 aa14.85□□□□□ -0.03
SFSWAP-205ENST00000537164 ABCA1O95477 2261 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 TRBV4-1A0A0J9YWV2 114 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 hCG_2039718K7EN88 272 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 AHCYL1O43865 530 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 SNAP29O95721 258 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 CD14P08571 375 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 SMIM11AP58511 58 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 FMODQ06828 376 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 KRTAP1-1Q07627 177 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 CD47Q08722 323 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 TOP3AQ13472 1001 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 SEC23BQ15437 767 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 KRTAP21-3Q3LHN1 58 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 KRT80Q6KB66 452 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 TMEM53Q6P2H8 277 aa14.84□□□□□ -0.03
SFSWAP-205ENST00000537164 VHLLQ6RSH7 139 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms