RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 Q96M85 177 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 KCTD7Q96MP8 289 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 BARHL1Q9BZE3 327 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 NMNAT2Q9BZQ4 307 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TPK1Q9H3S4 243 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ASB6Q9NWX5 421 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TAS2R10Q9NYW0 307 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 SLC6A5Q9Y345 797 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TMED7Q9Y3B3 224 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 CACNA1CQ13936 2221 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 A0A075B6Q4 140 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 TRDV1A0A1B0GX56 115 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 A0A1W2PQL4 384 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 IMPA2O14732 288 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SUSD5O60279 629 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 TRIM3O75382 744 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 CDRT1O95170 752 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 IL1AP01583 271 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 BGLAPP02818 100 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 MT-ND5P03915 603 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 HLA-DPB1P04440 258 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 F13BP05160 661 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 OCM2P0CE71 109 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 OCMP0CE72 109 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 APEHP13798 732 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 NAGAP17050 411 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SPI1P17947 270 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SDHAP31040 664 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 TMED10P49755 219 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 CTXN1P60606 82 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF85Q03923 595 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 MXD1Q05195 221 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 C17orf67Q0P5P2 114 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 PON3Q15166 354 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 HYAL4Q2M3T9 481 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 LCN1P1Q5VSP4 162 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 DCDC5Q6ZRR9 648 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 GRINAQ7Z429 371 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 JAZF1Q86VZ6 243 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 ADGRG3Q86Y34 549 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 DND1Q8IYX4 353 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 DNAJA3Q96EY1 480 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 CNN2Q99439 309 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SLC6A15Q9H2J7 730 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 LDAHQ9H6V9 325 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 TRIM36Q9NQ86 728 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 CRNNQ9UBG3 495 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 BOKQ9UMX3 212 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 GSTK1Q9Y2Q3 226 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 TMEM72A0PK05 275 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 IGHG3P01860 377 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 TFP02787 698 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 PTGDSP41222 190 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 CDKN2AP42771 156 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 DIO1P49895 249 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 PPP5CP53041 499 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 GPR50Q13585 617 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 RGS21Q2M5E4 152 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 LEG1Q6P5S2 330 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SNX29P2Q8IUI4 249 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 ARIH2OSQ8N7S6 290 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 ZNRF4Q8WWF5 429 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SLC25A46Q96AG3 418 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 C4orf36Q96KX1 117 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 DCLRE1CQ96SD1 692 aaKnown RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 COQ7Q99807 217 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 MED18Q9BUE0 208 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 PTDSS2Q9BVG9 487 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 ANGPTL4Q9BY76 406 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 NDEL1Q9GZM8 345 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 METTL7AQ9H8H3 244 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SMURF1Q9HCE7 757 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SPRR3Q9UBC9 169 aa10.67□□□□□ -0.7
CLIP1-208ENST00000537004 SIRT4Q9Y6E7 314 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-208ENST00000537004 APCP25054 2843 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 A8MVM7 634 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 B4DXG7 233 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 CTDSP2O14595 271 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 RNF13O43567 381 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 NPIPB7O75200 414 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 SULT1C4O75897 302 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 TXNDC12O95881 172 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 MT-ATP6P00846 226 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 CLEC2LP0C7M8 214 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 GDF1P27539 372 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 CD40LGP29965 261 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 SDC2P34741 201 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 NAA10P41227 235 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-208ENST00000537004 HTR3AP46098 478 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 TGM4P49221 684 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 HCCSP53701 268 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 IFITM3Q01628 133 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 BCL2A1Q16548 175 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 SLC35D3Q5M8T2 416 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 C1orf140Q5VVS0 124 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 SSX6Q7RTT6 188 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 RFLNBQ8N5W9 214 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms