RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 SNX18Q96RF0 628 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 ZNF347Q96SE7 839 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 REPIN1Q9BWE0 567 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 LRMDAQ9H2I8 198 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 C1orf198Q9H425 327 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 CDH20Q9HBT6 801 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 C20orf141Q9NUB4 165 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 FZR1Q9UM11 496 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 CAPN7Q9Y6W3 813 aa13.92□□□□□ -0.18
CLSTN3-204ENST00000535313 SVEP1Q4LDE5 3571 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 LILRA1O75019 489 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 TRMUO75648 421 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 ACADSP16219 412 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 TCN1P20061 433 aaPredicted RBP13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 KDELR2P33947 212 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 THBS2P35442 1172 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 MYBPC1Q00872 1141 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 PLP2Q04941 152 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 RIN1Q13671 783 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 HIST3H3Q16695 136 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 HSP90B2PQ58FF3 399 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 RGS7BPQ6MZT1 257 aaPredicted RBP13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 CGB2Q6NT52 195 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 UGT2A3Q6UWM9 527 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 IL17RELQ6ZVW7 336 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 LRP11Q86VZ4 500 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 OR1J2Q8NGS2 313 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 ASB10Q8WXI3 467 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 TPD52L3Q96J77 140 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 MRPL13Q9BYD1 178 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 KCNN2Q9H2S1 579 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 GPR160Q9UJ42 338 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 ZNF346Q9UL40 294 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 FBN3Q75N90 2809 aa13.91□□□□□ -0.18
CLSTN3-204ENST00000535313 IQCMA0A1B0GVH7 501 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 LYNX1G3V0Z9 82 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 MGRN1O60291 552 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 FAM157BP0CG42 384 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 LYNX1P0DP58 116 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 SEC24CP53992 1094 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 ST3GAL3Q11203 375 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 MAD2L1BPQ15013 274 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 TBC1D28Q2M2D7 210 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 PHC2Q8IXK0 858 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 MICU2Q8IYU8 434 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 LRRC18Q8N456 261 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 LINC01356Q8N9X3 169 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 MOSPD2Q8NHP6 518 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 LIPHQ8WWY8 451 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 LZICQ8WZA0 190 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 SEPHS2Q99611 448 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 SOX7Q9BT81 388 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 CCDC134Q9H6E4 229 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 MYEF2Q9P2K5 600 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 AP3M1Q9Y2T2 418 aa13.9□□□□□ -0.18
CLSTN3-204ENST00000535313 ELOVL7A1L3X0 281 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 SLC22A2O15244 555 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 HPXP02790 462 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 LCKP06239 509 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 NAT2P11245 290 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 NR2C1P13056 603 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 CCL2P13500 99 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 IL2RGP31785 369 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 RAD52P43351 418 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 GYS2P54840 703 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 SELENOWP63302 87 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 HSF2Q03933 536 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 TRIP10Q15642 601 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 NKPD1Q17RQ9 610 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 CR1LQ2VPA4 569 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 ELFN2Q5R3F8 820 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 C10orf128Q5T292 105 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 ARPINQ7Z6K5 226 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 PAQR4Q8N4S7 273 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 C11orf40Q8WZ69 217 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 RDH5Q92781 318 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 PRRC1Q96M27 445 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 OR51B6Q9H340 312 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 SIAEQ9HAT2 523 aa13.89□□□□□ -0.19
CLSTN3-204ENST00000535313 GMNCA6NCL1 334 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 NPIPB13A6NJU9 1138 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 NPIPB4C9JG80 1138 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 SNAP29O95721 258 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 TSPAN19P0C672 248 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 IFI30P13284 250 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 ACHEP22303 614 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 APLNRP35414 380 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 GPR6P46095 362 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF133P52736 654 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 KLF3P57682 345 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 CD47Q08722 323 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 CCNIQ14094 377 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 LAPTM4AQ15012 233 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 TAF11Q15544 211 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 ALKBH6Q3KRA9 238 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms