RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NPIPA7E9PJI5 369 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 PRAMEF26H0Y7S4 382 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 C15orf65H3BRN8 121 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 REM1O75628 298 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 UPK3AO75631 287 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SCELO95171 688 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CPSF4O95639 269 aaKnown RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 IGLV3-25P01717 112 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CXCL10P02778 98 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CTSGP08311 255 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CT62P0C5K7 136 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 NPIPA8P0DM63 369 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RRASP10301 218 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 NTF3P20783 257 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 HLA-DMAP28067 261 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 IL12AP29459 219 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 HSPA1LP34931 641 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RORAP35398 523 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 NPBWR2P48146 333 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 PRLHRP49683 370 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ACOT2P49753 483 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CCNG1P51959 295 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SUB1P53999 127 aaKnown RBP eCLIP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 NAPAP54920 295 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CRADDP78560 199 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 GABPB1Q06547 395 aaPredicted RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 C2orf54Q08AI8 447 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SLC9A3R2Q15599 337 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SLC25A52Q3SY17 297 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 LINC01620Q4KN68 170 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TP53I3Q53FA7 332 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 MPV17L2Q567V2 206 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 YIF1BQ5BJH7 314 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RNASE13Q5GAN3 156 aaKnown RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 XKR7Q5GH72 579 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TPGS2Q68CL5 300 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ZNF470Q6ECI4 717 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RAET1GQ6H3X3 334 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 MED27Q6P2C8 311 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TEX43Q6ZNM6 134 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 LHFPL4Q7Z7J7 247 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 DHRSXQ8N5I4 330 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ACOT4Q8N9L9 421 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 DNAAF3Q8N9W5 541 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 OR5L2Q8NGL0 311 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 EXOC6Q8TAG9 804 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 DQX1Q8TE96 717 aaKnown RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 FCGR1BQ92637 280 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ZFP3Q96NJ6 502 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TESK2Q96S53 571 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RSG1Q9BU20 258 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 EDEM2Q9BV94 578 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 FGF23Q9GZV9 251 aaPredicted RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RACGAP1Q9H0H5 632 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ATG10Q9H0Y0 220 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TMEM231Q9H6L2 316 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 POPDC2Q9HBU9 364 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ZCCHC17Q9NP64 241 aaKnown RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 AGPAT5Q9NUQ2 364 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SIGLEC8Q9NYZ4 499 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CGNQ9P2M7 1197 aaKnown RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SLC17A7Q9P2U7 560 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 FOXJ3Q9UPW0 622 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 AK6Q9Y3D8 172 aaKnown RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ATP6V0A2Q9Y487 856 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TSSC4Q9Y5U2 329 aaPredicted RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 MAST4O15021 2626 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 ABCC4O15439 1325 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 RPGRIP1LQ68CZ1 1315 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TRAV39A0A0B4J263 110 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 A0A0B4J2A0 478 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 IGHV7-4-1A0A0J9YVY3 117 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 ZNF860A6NHJ4 632 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 HIDE1A8MVS5 230 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 SYNGR2O43760 224 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 MGRN1O60291 552 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 LRATO95237 230 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 FSTL3O95633 263 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 OXSR1O95747 527 aaPredicted RBP-0.14□□□□□ -2.43
COPB1-212ENST00000534771 CA3P07451 260 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 LDHCP07864 332 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 ABHD2P08910 425 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 TCN1P20061 433 aaPredicted RBP-0.14□□□□□ -2.43
COPB1-212ENST00000534771 AKT2P31751 481 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 HRH1P35367 487 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 APLNRP35414 380 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 G6PCP35575 357 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 CASP3P42574 277 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 CSNK1EP49674 416 aaKnown RBP-0.14□□□□□ -2.43
COPB1-212ENST00000534771 ATP1B3P54709 279 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 OGDHQ02218 1023 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 SCRN3Q0VDG4 424 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 DOC2AQ14183 400 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 CARD16Q5EG05 197 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 METTL21CQ5VZV1 264 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 PLET1Q6UQ28 207 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 PGAP1Q75T13 922 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 DPY19L4Q7Z388 723 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 KRTAP19-3Q7Z4W3 81 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms