RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	VEGFC	P49767	419 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	SNTB2	Q13425	540 aa	Known RBP	7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	TRA2A	Q13595	282 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	TP53I3	Q53FA7	332 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	SLC35D3	Q5M8T2	416 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	MANEA	Q5SRI9	462 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	B3GNTL1	Q67FW5	361 aa	Predicted RBP	7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	RGS7BP	Q6MZT1	257 aa	Predicted RBP	7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	PRSS45	Q7RTY3	260 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	KCTD20	Q7Z5Y7	419 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	FTMT	Q8N4E7	242 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	EXD3	Q8N9H8	876 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	AGBL5	Q8NDL9	886 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	BEST4	Q8NFU0	473 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR4K14	Q8NGD5	310 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR2T35	Q8NGX2	323 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR52I2	Q8NH67	350 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	THEM6	Q8WUY1	208 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	NACC2	Q96BF6	587 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	CCDC120	Q96HB5	630 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	CCDC74B	Q96LY2	380 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR2M4	Q96R27	311 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	TAAR9	Q96RI9	348 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	CNN2	Q99439	309 aa	Known RBP	7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	SLC38A3	Q99624	504 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	DPYSL5	Q9BPU6	564 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	MRI1	Q9BV20	369 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	SEMA4C	Q9C0C4	833 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	B3GNT4	Q9C0J1	378 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR51V1	Q9H2C8	321 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	METTL17	Q9H7H0	456 aa	Predicted RBP	7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	KLHL1	Q9NR64	748 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	FBXO34	Q9NWN3	711 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	FOXJ2	Q9P0K8	574 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	MGAT4C	Q9UBM8	478 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	COPS3	Q9UNS2	423 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	FLVCR2	Q9UPI3	526 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	FOXJ3	Q9UPW0	622 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	RCE1	Q9Y256	329 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	KCNK6	Q9Y257	313 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	SLC22A7	Q9Y694	548 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	SCN2A	Q99250	2005 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	BSN	Q9UPA5	3926 aa		7.09	□□□□□ -1.27
SPIDR-223	ENST00000524033	ASXL3	Q9C0F0	2248 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NPIPA5	A0A0B4J1W7	369 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	TRBV5-5	A0A0J9YX44	114 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	IFITM5	A6NNB3	132 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	HMSD	A8MTL9	139 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033		A8MXK9	166 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PRR32	B1ATL7	298 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	MCRIP1	C9JLW8	97 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NPIPA7	E9PJI5	369 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NPIPB9	F8W1W9	429 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	STMND1	H3BQB6	276 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033		J3QKU1	62 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PEX12	O00623	359 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PDCD5	O14737	125 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NKX2-2	O95096	273 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NDUFB6	O95139	128 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	ABHD16A	O95870	558 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	ITGB2	P05107	769 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NMB	P08949	121 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	RAB40AL	P0C0E4	278 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NPIPA8	P0DM63	369 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	C4BPB	P20851	252 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	COL8A1	P27658	744 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CD82	P27701	267 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	RAD52	P43351	418 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	FASLG	P48023	281 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	DIO1	P49895	249 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	P2RX1	P51575	399 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SCAND1	P57086	179 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	AP3S2	P59780	193 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	TSPAN5	P62079	268 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SIRPA	P78324	504 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	POU6F2	P78424	691 aa	Predicted RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	DBP	Q10586	325 aa	Predicted RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SRSF6	Q13247	344 aa	Known RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	GPR68	Q15743	365 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PRICKLE4	Q2TBC4	344 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	LINC00303	Q3SY05	128 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	TCTE1	Q5JU00	501 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	DCAF12	Q5T6F0	453 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	LINC01590	Q5TEZ4	76 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PWWP2B	Q6NUJ5	590 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	TMEM71	Q6P5X7	295 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	LRFN4	Q6PJG9	635 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	WDR74	Q6RFH5	385 aa	Predicted RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	C3P1	Q6ZMU1	363 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC36A1	Q7Z2H8	476 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZAR1	Q86SH2	424 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	VASH2	Q86V25	355 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	DTX1	Q86Y01	620 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	IZUMO1	Q8IYV9	350 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	EIF4E3	Q8N5X7	224 aa	Known RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CDRT4	Q8N9R6	151 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CYB561A3	Q8NBI2	242 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	KCT2	Q8NC54	265 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR10G6	Q8NH81	332 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SMAP2	Q8WU79	429 aa	Predicted RBP	7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms