RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 STMN3Q9NZ72 180 aa7.49□□□□□ -1.21
RNF4-220ENST00000513578 MRM2Q9UI43 246 aaKnown RBP7.49□□□□□ -1.21
RNF4-220ENST00000513578 LAMP5Q9UJQ1 280 aa7.49□□□□□ -1.21
RNF4-220ENST00000513578 GNG8Q9UK08 70 aa7.49□□□□□ -1.21
RNF4-220ENST00000513578 DKKL1Q9UK85 242 aa7.49□□□□□ -1.21
RNF4-220ENST00000513578 DMDP11532 3685 aa7.49□□□□□ -1.21
RNF4-220ENST00000513578 ALPK2Q86TB3 2170 aa7.49□□□□□ -1.21
RNF4-220ENST00000513578 MAP1BP46821 2468 aaKnown RBP7.49□□□□□ -1.21
RNF4-220ENST00000513578 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 TRBV2A0A0J9YWF9 115 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 LRRC3CA6NJW4 275 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CD8B2A6NJW9 211 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 PRR32B1ATL7 298 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 J3QRK9 145 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SULT2B1O00204 365 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ZNF593O00488 134 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 CTDSP2O14595 271 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 TM4SF5O14894 197 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CASKO14936 926 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 LRRTM2O43300 516 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ZNF254O75437 659 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SERPINI2O75830 405 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 UCHL1P09936 223 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CLEC2LP0C7M8 214 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CD8BP10966 210 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 NR2C1P13056 603 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 EDNRAP25101 427 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SHC1P29353 583 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 RBMS1P29558 406 aaKnown RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 TNFSF8P32971 234 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 GABREP78334 506 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 FOXK1P85037 733 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SLC3A1Q07837 685 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 DBPQ10586 325 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 FOXO1Q12778 655 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 HNRNPA0Q13151 305 aaKnown RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 ALKBH1Q13686 389 aaKnown RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 SLC17A1Q14916 467 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 KCNMB1Q16558 191 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 TMEM176BQ3YBM2 270 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 ZMAT1Q5H9K5 638 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SPANXN2Q5MJ10 180 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ABHD17BQ5VST6 288 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 LIPNQ5VXI9 398 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SLC18B1Q6NT16 456 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 MZT2AQ6P582 158 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 KCTD18Q6PI47 426 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 RHOUQ7L0Q8 258 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 DPY19L4Q7Z388 723 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CEACAM19Q7Z692 300 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ZNF679Q8IYX0 411 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 GHDCQ8N2G8 530 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 PARP16Q8N5Y8 322 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SYT14Q8NB59 555 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SLC26A10Q8NG04 563 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 OR6N2Q8NGY6 317 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ADAMTS14Q8WXS8 1223 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 KIAA1143Q96AT1 154 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 INTS12Q96CB8 462 aaKnown RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 SLC25A44Q96H78 314 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 MAP6Q96JE9 813 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 GNRHR2Q96P88 292 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 UBL7Q96S82 380 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 FAM173AQ9BQD7 235 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SLC30A2Q9BRI3 323 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 TTYH2Q9BSA4 534 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CCDC32Q9BV29 185 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 SF3B5Q9BWJ5 86 aaKnown RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 MROQ9BYG7 248 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 RNF32Q9H0A6 362 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNF4-220ENST00000513578 ZFP64Q9NPA5 681 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ASCL3Q9NQ33 180 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ACOXLQ9NUZ1 547 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 QPCTLQ9NXS2 382 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 KCNG2Q9UJ96 466 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 BOKQ9UMX3 212 aaPredicted RBP7.48□□□□□ -1.21
RNF4-220ENST00000513578 KLHDC2Q9Y2U9 406 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 ZNF281Q9Y2X9 895 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 GRIP1Q9Y3R0 1128 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 CMAHPQ9Y471 501 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 WDR87Q6ZQQ6 2873 aa7.48□□□□□ -1.21
RNF4-220ENST00000513578 RIF1Q5UIP0 2472 aaKnown RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 AHCTF1Q8WYP5 2266 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TRBV5-5A0A0J9YX44 114 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 A0A1W2PNR3 127 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TVP23AA6NH52 213 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 OR4C45A6NMZ5 311 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 FAM171A2A8MVW0 826 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 MASP2O00187 686 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TLX3O43711 291 aaPredicted RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 UPK1BO75841 260 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 NEURL1O76050 574 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 IGHG1P01857 330 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RAF1P04049 648 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 HPNP05981 417 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 PGA4P0DJD7 388 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms