RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GAL3ST1Q99999 423 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 LZTS2Q9BRK4 669 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 UPF3BQ9BZI7 483 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 MFSD1Q9H3U5 465 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 NARFLQ9H6Q4 476 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 FOLH1BQ9HBA9 442 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PSMC3IPQ9P2W1 217 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 DCDC2Q9UHG0 476 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 UBQLN1Q9UMX0 589 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 HES2Q9Y543 173 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 DOCK5Q9H7D0 1870 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 EP300Q09472 2414 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 NFASCO94856 1347 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 SPTBN2O15020 2390 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 ABCA7Q8IZY2 2146 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 SMCO3A2RU48 225 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 TCP11X1B4DZS4 312 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 C9JVG2 144 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 DCTN6O00399 190 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 DNALI1O14645 258 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 HSD17B6O14756 317 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 B4GALT5O43286 388 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CACNG3O60359 315 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 TMEM50AO95807 157 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 LGI1O95970 557 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 GAPDHP04406 335 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 P04436 131 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 DCNP07585 359 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR8U8P0C7N1 319 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CCDC166P0CW27 439 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 HTR1FP30939 366 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 HSD17B2P37059 387 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 MDH2P40926 338 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 SLC26A2P50443 739 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 BIDP55957 195 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 BCL2L1Q07817 233 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 SCRN3Q0VDG4 424 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR5I1Q13606 314 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 GNMTQ14749 295 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 ZNF77Q15935 545 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 MICBQ29980 383 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 GSG1Q2KHT4 349 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 C15orf32Q32M92 178 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 SPANXN2Q5MJ10 180 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 ATAD3CQ5T2N8 411 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 LRRC66Q68CR7 880 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CGB2Q6NT52 195 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 GSG1LQ6UXU4 331 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CENPQQ7L2Z9 268 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 MOB1BQ7L9L4 216 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 HPS6Q86YV9 775 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 FTMTQ8N4E7 242 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 BBOF1Q8ND07 529 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CCDC148Q8NFR7 591 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR4C5Q8NGB2 326 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR4F6Q8NGB9 312 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR4K14Q8NGD5 310 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR13F1Q8NGS4 319 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 FAM81AQ8TBF8 368 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 FAM110BQ8TC76 370 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 ZPLD1Q8TCW7 415 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 STMN2Q93045 179 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 MCUR1Q96AQ8 359 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 PAGE5Q96GU1 130 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CPB2Q96IY4 423 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 PLEKHA8Q96JA3 519 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 KIR2DL4Q99706 377 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 C19orf24Q9BVV8 132 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 ILKAPQ9H0C8 392 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CXCL16Q9H2A7 254 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 NXF3Q9H4D5 531 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 EXO5Q9H790 373 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 MARCH5Q9NX47 278 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 APOBEC3BQ9UH17 382 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 KCNIP3Q9Y2W7 256 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CSDC2Q9Y534 153 aaKnown RBP2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CEP250Q9BV73 2442 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 COL1A2P08123 1366 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 KIAA1671Q9BY89 1806 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 CHD8Q9HCK8 2581 aa2.44□□□□□ -2.02
TRAPPC11-205ENST00000506426 WDR87Q6ZQQ6 2873 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 KMT2EQ8IZD2 1858 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 VPS13AQ96RL7 3174 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 CEP295Q9C0D2 2601 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 DCHS1Q96JQ0 3298 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 BAZ2BQ9UIF8 2168 aaKnown RBP2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 PHF3Q92576 2039 aaKnown RBP2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 IGHV7-81A0A0B4J1V7 117 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 SERTM2A0A1B0GWG4 89 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 A0A1W2PPV9 198 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR5B21A6NL26 309 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 GFYI3L273 518 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 WRBO00258 174 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 PSTPIP1O43586 416 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 DFNA5O60443 496 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 CDH16O75309 829 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 LYPLA1O75608 230 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 STAMBPO95630 424 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 SERPIND1P05546 499 aa2.43□□□□□ -2.02
TRAPPC11-205ENST00000506426 KLK3P07288 261 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms