RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 MAD2L1BPQ15013 274 aaPredicted RBP16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 HIST3H3Q16695 136 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 IL17RELQ6ZVW7 336 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 LRRC18Q8N456 261 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 LZICQ8WZA0 190 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 PRRC1Q96M27 445 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 MRPL13Q9BYD1 178 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 CCDC134Q9H6E4 229 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 CDH20Q9HBT6 801 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 CMTM6Q9NX76 183 aa16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 MYEF2Q9P2K5 600 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 GMPR2Q9P2T1 348 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-215ENST00000503418 A0A1W2PPW3 197 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 RNF212BA8MTL3 300 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 CENPBD1B2RD01 187 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 SLC2A10O95528 541 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 TGFAP01135 160 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 YAP1P46937 504 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 SEC24CP53992 1094 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 TOP3AQ13472 1001 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 LAPTM4AQ15012 233 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 RGS7BPQ6MZT1 257 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 ARPINQ7Z6K5 226 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 DPPA2Q7Z7J5 298 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 PAQR4Q8N4S7 273 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 RBM15BQ8NDT2 890 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 RP9Q8TA86 221 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 LIPHQ8WWY8 451 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 SNX18Q96RF0 628 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 SOX7Q9BT81 388 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 MS4A5Q9H3V2 200 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 STX18Q9P2W9 335 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 A4GNTQ9UNA3 340 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 AP3M1Q9Y2T2 418 aa16.71■□□□□ 0.27
UBE2D3-215ENST00000503418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■■□ 20.8
UBE2D3-215ENST00000503418 IFI30P13284 250 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 CHN2P52757 468 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 PLP2Q04941 152 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 CD47Q08722 323 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 TBC1D28Q2M2D7 210 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 ALKBH6Q3KRA9 238 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 NRN1LQ496H8 165 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 ALG10Q5BKT4 473 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 ARMC4Q5T2S8 1044 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 VTCN1Q7Z7D3 282 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 SPATA3Q8NHX4 192 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 NSMAFQ92636 917 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 HDAC2Q92769 488 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 BPIFA2Q96DR5 249 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 SEPHS2Q99611 448 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 KCNN2Q9H2S1 579 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 C1orf198Q9H425 327 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 RHCGQ9UBD6 479 aa16.7■□□□□ 0.26
UBE2D3-215ENST00000503418 COL6A5A8TX70 2615 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 IQCMA0A1B0GVH7 501 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 SLC22A23A1A5C7 686 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 J3KTA2 159 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 GSTA4O15217 222 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 LILRA1O75019 489 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF682O95780 498 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 PTHP01270 115 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 IFNW1P05000 195 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 TACSTD2P09758 323 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 TSPAN19P0C672 248 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 SAGP10523 405 aaPredicted RBP16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 COX4I1P13073 169 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 SRD5A1P18405 259 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 APEX1P27695 318 aaKnown RBP16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 IL2RGP31785 369 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 CDAP32320 146 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 HSF2Q03933 536 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 LIPEQ05469 1076 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 FMODQ06828 376 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 RIN1Q13671 783 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 TRIP10Q15642 601 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 NKPD1Q17RQ9 610 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 FAM120AOSQ5T036 256 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 C10orf128Q5T292 105 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 MEX3DQ86XN8 651 aaKnown RBP16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 SLC15A3Q8IY34 581 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 ICA1LQ8NDH6 482 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 OR1J2Q8NGS2 313 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 FNDC11Q9BVV2 318 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 TXNIPQ9H3M7 391 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 CCNB1IP1Q9NPC3 277 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 HIF3AQ9Y2N7 669 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 SNX13Q9Y5W8 968 aa16.69■□□□□ 0.26
UBE2D3-215ENST00000503418 CXCR6O00574 342 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 HPXP02790 462 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 LCKP06239 509 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 NAT2P11245 290 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 HNF1AP20823 631 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 FUT4P22083 530 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 APLNRP35414 380 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 MDH1P40925 334 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 SLC7A2P52569 658 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF133P52736 654 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 SELENOVP59797 346 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 ERVS71-1P61550 626 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 CCNIQ14094 377 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms