RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SYNGR3O43761 229 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 MGRN1O60291 552 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 STAMBPO95630 424 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 PTHP01270 115 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 IFNW1P05000 195 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ADRA2AP08913 450 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 SAGP10523 405 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 NR2C1P13056 603 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 APEHP13798 732 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 DAOP14920 347 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ZNF16P17020 682 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 GZMKP49863 264 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ZNF133P52736 654 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TRAM2Q15035 370 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TAF11Q15544 211 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 FXNQ16595 210 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 MSMPQ1L6U9 139 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TBC1D28Q2M2D7 210 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 CHRFAM7AQ494W8 412 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 IFI44LQ53G44 452 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ALG10Q5BKT4 473 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 C10orf128Q5T292 105 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ARMC4Q5T2S8 1044 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 C8orf82Q6P1X6 216 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 HACD2Q6Y1H2 254 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 FKBP9P1Q75LS8 142 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 CBLL1Q75N03 491 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 OFCC1Q8IZS5 231 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 LRRC18Q8N456 261 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 SYT14Q8NB59 555 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ZNF540Q8NDQ6 660 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 SLC30A7Q8NEW0 376 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 GEMIN6Q8WXD5 167 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 HDAC2Q92769 488 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 ELAC2Q9BQ52 826 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 SYT3Q9BQG1 590 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 BPESC1Q9GZL8 116 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 KCNN2Q9H2S1 579 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TXNIPQ9H3M7 391 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TPK1Q9H3S4 243 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 C1orf198Q9H425 327 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 CDH20Q9HBT6 801 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TMEM160Q9NX00 188 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 SNX13Q9Y5W8 968 aa7.3□□□□□ -1.24
HMGXB4-207ENST00000498212 TLN2Q9Y4G6 2542 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 IGHV4-61A0A0C4DH41 118 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 IQCMA0A1B0GVH7 501 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 SLC22A23A1A5C7 686 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 GMNCA6NCL1 334 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 M0R233 179 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 FFAR1O14842 300 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 ATP8B1O43520 1251 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 SLC2A10O95528 541 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 SERPINA1P01009 418 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 IFNA2P01563 188 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 IGHMP01871 453 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 IGFBP1P08833 259 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 FAM157BP0CG42 384 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 MAKP20794 623 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 FUT4P22083 530 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 GIFP27352 417 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 CDAP32320 146 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 GSK3BP49841 420 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 CTXN1P60606 82 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 RPL27P61353 136 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 MRPS34P82930 218 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 PLP2Q04941 152 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 PRKCDQ05655 676 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 FMODQ06828 376 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 CD47Q08722 323 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 TOP3AQ13472 1001 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 RGS7BPQ6MZT1 257 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 PODNL1Q6PEZ8 512 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 ZNF730Q6ZMV8 503 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 OAFQ86UD1 273 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 IGFN1Q86VF2 1251 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 LRP11Q86VZ4 500 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 NRMQ8IXM6 262 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 RNF113BQ8IZP6 322 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 ZNF786Q8N393 782 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 RBM15BQ8NDT2 890 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 OR1J2Q8NGS2 313 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 FNDC8Q8TC99 324 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 UBASH3BQ8TF42 649 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 ACOT11Q8WXI4 607 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 FAM162AQ96A26 154 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 CMTM5Q96DZ9 223 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 HSH2DQ96JZ2 352 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 KCTD14Q9BQ13 255 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 MS4A5Q9H3V2 200 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 SIAEQ9HAT2 523 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 SMURF2Q9HAU4 748 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 CCNB1IP1Q9NPC3 277 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 MAN2C1Q9NTJ4 1040 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 MYEF2Q9P2K5 600 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 ABCD2Q9UBJ2 740 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 REV1Q9UBZ9 1251 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 DUSP13Q9UII6 198 aa7.29□□□□□ -1.24
HMGXB4-207ENST00000498212 CDC42EP3Q9UKI2 254 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms