RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZNF587BE7ETH6 402 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PDE6DO43924 150 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SC5DO75845 299 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CEACAM4O75871 244 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SNAPC5O75971 98 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 STBD1O95210 358 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 THY1P04216 161 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CD2P06729 351 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 GRPP07492 148 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CSF3P09919 207 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB40ALP0C0E4 278 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 B4GALT1P15291 398 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RPS3P23396 243 aaKnown RBP eCLIP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FCGR2BP31994 310 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 GKP32189 559 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR1D2P34982 312 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 HTR6P50406 440 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM3BP58499 235 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RPS6P62753 249 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LCN2P80188 198 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 UBE2V1Q13404 147 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 NFATC2Q13469 925 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 EXOSC2Q13868 293 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 KIAA0141Q14154 515 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SMN1Q16637 294 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 UGCGQ16739 394 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PRTGQ2VWP7 1150 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ADPRMQ3LIE5 342 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM176BQ3YBM2 270 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RFTN2Q52LD8 501 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 AKR1C8PQ5T2L2 129 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 METRNLQ641Q3 311 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 STEAP4Q687X5 459 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 STEAP1BQ6NZ63 245 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ACSM6Q6P461 480 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 KCNIP4Q6PIL6 250 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM107Q6UX40 140 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TMPPEQ6ZT21 453 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM183BPQ6ZVS7 135 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TRMT1LQ7Z2T5 733 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SCD5Q86SK9 330 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LINC01551Q86U37 167 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SVBPQ8N300 66 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 C11orf42Q8N5U0 333 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CSNK1A1LQ8N752 337 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 YIPF7Q8N8F6 280 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CDRT4Q8N9R6 151 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 HJURPQ8NCD3 748 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR2Z1Q8NG97 314 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4E2Q8NGC2 313 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 NUDCD2Q8WVJ2 157 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 HPSE2Q8WWQ2 592 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RORBQ92753 470 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LHX4Q969G2 390 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RERGQ96A58 199 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PINX1Q96BK5 328 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 BTN2A3PQ96KV6 586 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PRMT6Q96LA8 375 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR52E6Q96RD3 313 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PLEKHF1Q96S99 279 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FMO2Q99518 471 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TRIM51Q9BSJ1 452 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PITPNM3Q9BZ71 974 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 BARHL1Q9BZE3 327 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 DHX35Q9H5Z1 703 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ALG9Q9H6U8 611 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB18Q9NP72 206 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 STEAP1Q9UHE8 339 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 NDRG4Q9ULP0 352 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 HHLA2Q9UM44 414 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OSGIN2Q9Y236 505 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CMAHPQ9Y471 501 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 V9GYS6 101 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FLT4P35916 1363 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 DIP2AQ14689 1571 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MST1RQ04912 1400 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ALKQ9UM73 1620 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 WDR81Q562E7 1941 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TGIF2-C20orf24A0A0A6YYL0 155 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A1W2PPM1 405 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 H0YIG0 161 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FAAHO00519 579 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 PIAS1O75925 651 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR6A2O95222 327 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ETHE1O95571 254 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 GPR75O95800 540 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CST1P01037 141 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 EGFP01133 1207 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FTH1P19P0C7X4 201 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 NR2F6P10588 404 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FCGR2AP12318 317 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LYL1P12980 280 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MMP11P24347 488 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 F2RP25116 425 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 HTR2AP28223 471 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 QARSP47897 775 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 UQCRFS1P47985 274 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SOX2P48431 317 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CLCN3P51790 818 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 NAPAP54920 295 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms