RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC15A3Q8IY34 581 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 POU5F2Q8N7G0 328 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 SLC30A7Q8NEW0 376 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 MOSPD2Q8NHP6 518 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 SPATA3Q8NHX4 192 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 ASB10Q8WXI3 467 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 MSI2Q96DH6 328 aaKnown RBP10.97□□□□□ -0.65
PTPRF-214ENST00000496043 SEPHS2Q99611 448 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 SYT3Q9BQG1 590 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 TXNIPQ9H3M7 391 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 EFCAB1Q9HAE3 211 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 SIAEQ9HAT2 523 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 CDH20Q9HBT6 801 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 DUSP13Q9UII6 198 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 KCNS2Q9ULS6 477 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 A4GNTQ9UNA3 340 aa10.97□□□□□ -0.65
PTPRF-214ENST00000496043 ANK3Q12955 4377 aaKnown RBP10.97□□□□□ -0.65
PTPRF-214ENST00000496043 NPIPB13A6NJU9 1138 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 NPIPB4C9JG80 1138 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 TGFAP01135 160 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 NR2C1P13056 603 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 IFI30P13284 250 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF16P17020 682 aaPredicted RBP10.96□□□□□ -0.65
PTPRF-214ENST00000496043 TCN1P20061 433 aaPredicted RBP10.96□□□□□ -0.65
PTPRF-214ENST00000496043 RAD52P43351 418 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 YAP1P46937 504 aaKnown RBP10.96□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF133P52736 654 aaPredicted RBP10.96□□□□□ -0.65
PTPRF-214ENST00000496043 CHN2P52757 468 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 LIPEQ05469 1076 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 ALG10Q5BKT4 473 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 C10orf128Q5T292 105 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 ARMC4Q5T2S8 1044 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.65
PTPRF-214ENST00000496043 LRP11Q86VZ4 500 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 LRRC18Q8N456 261 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 NOXO1Q8NFA2 376 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 BPIFA2Q96DR5 249 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 PRRC1Q96M27 445 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 RBP7Q96R05 134 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 FNDC11Q9BVV2 318 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 TPK1Q9H3S4 243 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 MED4Q9NPJ6 270 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 GPR160Q9UJ42 338 aa10.96□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF346Q9UL40 294 aaKnown RBP10.96□□□□□ -0.65
PTPRF-214ENST00000496043 LYNX1G3V0Z9 82 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 CXCR6O00574 342 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 NDUFAB1O14561 156 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 IFNW1P05000 195 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 TACSTD2P09758 323 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 LYNX1P0DP58 116 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 APLNRP35414 380 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 GUCA1AP43080 201 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-214ENST00000496043 ALDH3B1P43353 468 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 SEC24CP53992 1094 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 UCP2P55851 309 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 CTXN1P60606 82 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 MRPS34P82930 218 aaKnown RBP10.95□□□□□ -0.66
PTPRF-214ENST00000496043 HSF2Q03933 536 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 RIN1Q13671 783 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 TRAM2Q15035 370 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 SGCAQ16586 387 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 ANKDD1AQ495B1 522 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 THEM4Q5T1C6 240 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 UGT2A3Q6UWM9 527 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 FKBP9P1Q75LS8 142 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 RNF113BQ8IZP6 322 aaKnown RBP10.95□□□□□ -0.66
PTPRF-214ENST00000496043 ARIH2OSQ8N7S6 290 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 RBM15BQ8NDT2 890 aaKnown RBP10.95□□□□□ -0.66
PTPRF-214ENST00000496043 FNDC8Q8TC99 324 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 C11orf40Q8WZ69 217 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 HDAC2Q92769 488 aaKnown RBP10.95□□□□□ -0.66
PTPRF-214ENST00000496043 RDH5Q92781 318 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 HPS1Q92902 700 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 SMURF2Q9HAU4 748 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 CCNB1IP1Q9NPC3 277 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 FZR1Q9UM11 496 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 HIF3AQ9Y2N7 669 aa10.95□□□□□ -0.66
PTPRF-214ENST00000496043 YLPM1P49750 1951 aaKnown RBP10.95□□□□□ -0.66
PTPRF-214ENST00000496043 A0A1W2PPW3 197 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 LRP5LA4QPB2 252 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 RNF212BA8MTL3 300 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 PIP5K1CO60331 668 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 LILRA1O75019 489 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 SNAP29O95721 258 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 ZNF682O95780 498 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 LCKP06239 509 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 FAM157BP0CG42 384 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 SAGP10523 405 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-214ENST00000496043 CCL2P13500 99 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 MAKP20794 623 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 COL8A2P25067 703 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 CDAP32320 146 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 RPL27P61353 136 aaKnown RBP10.94□□□□□ -0.66
PTPRF-214ENST00000496043 PRKCDQ05655 676 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 CD47Q08722 323 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 MAD2L1BPQ15013 274 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-214ENST00000496043 MOGQ16653 247 aa10.94□□□□□ -0.66
PTPRF-214ENST00000496043 IFI44LQ53G44 452 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms