RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ASB10Q8WXI3 467 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 MRPL24Q96A35 216 aaKnown RBP8.26□□□□□ -1.09
MSH5-218ENST00000494646 CITED4Q96RK1 184 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 SOX7Q9BT81 388 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 INIPQ9NRY2 104 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 REV1Q9UBZ9 1251 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 A4GNTQ9UNA3 340 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 MED31Q9Y3C7 131 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 SNX13Q9Y5W8 968 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 CAPN7Q9Y6W3 813 aa8.26□□□□□ -1.09
MSH5-218ENST00000494646 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.26□□□□□ -1.091e-6■□□□□ 10.9
MSH5-218ENST00000494646 RNF212BA8MTL3 300 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 FAM220BPB1ANY3 271 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 SYNGR3O43761 229 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 LILRA1O75019 489 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 SLC2A10O95528 541 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ZNF682O95780 498 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 CLPTM1O96005 669 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 HPXP02790 462 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ERCC1P07992 297 aaPredicted RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 NAT2P11245 290 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 COX4I1P13073 169 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ZNF23P17027 643 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 CCNOP22674 350 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 IL2RGP31785 369 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 CDAP32320 146 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 LSP1P33241 339 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 RBM34P42696 430 aaKnown RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 ZNF84P51523 738 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 LIPEQ05469 1076 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ST3GAL3Q11203 375 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 TRIP10Q15642 601 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 SGCAQ16586 387 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 FXNQ16595 210 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 HIST3H3Q16695 136 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 TMEM53Q6P2H8 277 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 IGFN1Q86VF2 1251 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 SLC15A3Q8IY34 581 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ZNF786Q8N393 782 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ZNF540Q8NDQ6 660 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 SLC30A7Q8NEW0 376 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 RP9Q8TA86 221 aaKnown RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 NSMAFQ92636 917 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 HDAC2Q92769 488 aaKnown RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 MRPL13Q9BYD1 178 aaKnown RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 SHARPINQ9H0F6 387 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 DENND2DQ9H6A0 471 aaPredicted RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 CDH20Q9HBT6 801 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 MYOZ1Q9NP98 299 aaPredicted RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 MRGBPQ9NV56 204 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 FBXO9Q9UK97 447 aaPredicted RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ZNF346Q9UL40 294 aaKnown RBP8.25□□□□□ -1.09
MSH5-218ENST00000494646 KCNS2Q9ULS6 477 aa8.25□□□□□ -1.09
MSH5-218ENST00000494646 ANK2Q01484 3957 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 IGKV1D-43A0A0B4J1Z2 117 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 CXCR6O00574 342 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 GSTA4O15217 222 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 LCKP06239 509 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 FAM157CP0CG43 387 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 THRBP10828 461 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 MAKP20794 623 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 IGFBP5P24593 272 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 APEX1P27695 318 aaKnown RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 IFNA8P32881 189 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 MDH1P40925 334 aaKnown RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 EVX1P49640 407 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 CTXN1P60606 82 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 ERVS71-1P61550 626 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 SRSF2Q01130 221 aaKnown RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 PLP2Q04941 152 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 FMODQ06828 376 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 TOP3AQ13472 1001 aaPredicted RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 SLC36A2Q495M3 483 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 HSP90B2PQ58FF3 399 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 ALG10Q5BKT4 473 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 FAM120AOSQ5T036 256 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 ARMC4Q5T2S8 1044 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 FAM166AQ6J272 317 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 RGS7BPQ6MZT1 257 aaPredicted RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 TBPL2Q6SJ96 375 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 TREML1Q86YW5 311 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 CLDN22Q8N7P3 220 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 ICA1LQ8NDH6 482 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 CPEB3Q8NE35 698 aaKnown RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 OR51A7Q8NH64 312 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 LZICQ8WZA0 190 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 BPIFA2Q96DR5 249 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 TSPAN32Q96QS1 320 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 SNX18Q96RF0 628 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 POLR2J2Q9GZM3 115 aaKnown RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 POLR2J3Q9H1A7 115 aaKnown RBP8.24□□□□□ -1.09
MSH5-218ENST00000494646 KCNN2Q9H2S1 579 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 TXNIPQ9H3M7 391 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 MS4A5Q9H3V2 200 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 CCDC134Q9H6E4 229 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 TAAR3PQ9P1P4 343 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 SLC7A8Q9UHI5 535 aa8.24□□□□□ -1.09
MSH5-218ENST00000494646 FBXL3Q9UKT7 428 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms