RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 ATP5C1P36542 298 aaKnown RBP2.57□□□□□ -2
NCL-210ENST00000494618 CDKN2BP42772 138 aa2.57□□□□□ -2
NCL-210ENST00000494618 CCT3P49368 545 aaKnown RBP2.57□□□□□ -2
NCL-210ENST00000494618 ATP1B3P54709 279 aa2.57□□□□□ -2
NCL-210ENST00000494618 MRPL28Q13084 256 aaKnown RBP2.57□□□□□ -2
NCL-210ENST00000494618 FAM78AQ5JUQ0 283 aa2.57□□□□□ -2
NCL-210ENST00000494618 PDZK1Q5T2W1 519 aa2.57□□□□□ -2
NCL-210ENST00000494618 ATAD3BQ5T9A4 648 aa2.57□□□□□ -2
NCL-210ENST00000494618 ENPP6Q6UWR7 440 aa2.57□□□□□ -2
NCL-210ENST00000494618 KDM7AQ6ZMT4 941 aa2.57□□□□□ -2
NCL-210ENST00000494618 NTM-AS1Q6ZSK4 140 aa2.57□□□□□ -2
NCL-210ENST00000494618 LGI3Q8N145 548 aa2.57□□□□□ -2
NCL-210ENST00000494618 RSPH1Q8WYR4 309 aa2.57□□□□□ -2
NCL-210ENST00000494618 STMN2Q93045 179 aa2.57□□□□□ -2
NCL-210ENST00000494618 COQ2Q96H96 371 aa2.57□□□□□ -2
NCL-210ENST00000494618 DOK1Q99704 481 aa2.57□□□□□ -2
NCL-210ENST00000494618 CDHR2Q9BYE9 1310 aa2.57□□□□□ -2
NCL-210ENST00000494618 TRAV26-1A0A087WT03 109 aa2.56□□□□□ -2
NCL-210ENST00000494618 MAGEB3O15480 346 aa2.56□□□□□ -2
NCL-210ENST00000494618 RAB3DO95716 219 aa2.56□□□□□ -2
NCL-210ENST00000494618 CALM1P0DP23 149 aa2.56□□□□□ -2
NCL-210ENST00000494618 CALM2P0DP24 149 aa2.56□□□□□ -2
NCL-210ENST00000494618 CALM3P0DP25 149 aa2.56□□□□□ -2
NCL-210ENST00000494618 SERPINB5P36952 375 aa2.56□□□□□ -2
NCL-210ENST00000494618 OGDHQ02218 1023 aa2.56□□□□□ -2
NCL-210ENST00000494618 LOXL1Q08397 574 aaPredicted RBP2.56□□□□□ -2
NCL-210ENST00000494618 LRRC23Q53EV4 343 aaPredicted RBP2.56□□□□□ -2
NCL-210ENST00000494618 DUX4L9Q6RFH8 374 aaPredicted RBP2.56□□□□□ -2
NCL-210ENST00000494618 HDDC2Q7Z4H3 204 aa2.56□□□□□ -2
NCL-210ENST00000494618 ARL6IP6Q8N6S5 226 aa2.56□□□□□ -2
NCL-210ENST00000494618 FAM83FQ8NEG4 500 aaPredicted RBP2.56□□□□□ -2
NCL-210ENST00000494618 NOXO1Q8NFA2 376 aa2.56□□□□□ -2
NCL-210ENST00000494618 ABHD3Q8WU67 409 aa2.56□□□□□ -2
NCL-210ENST00000494618 CREB3L1Q96BA8 519 aa2.56□□□□□ -2
NCL-210ENST00000494618 C10orf35Q96D05 121 aa2.56□□□□□ -2
NCL-210ENST00000494618 L3HYPDHQ96EM0 354 aa2.56□□□□□ -2
NCL-210ENST00000494618 TSGA13Q96PP4 275 aa2.56□□□□□ -2
NCL-210ENST00000494618 SH3GL1Q99961 368 aa2.56□□□□□ -2
NCL-210ENST00000494618 SYNDIG1Q9H7V2 258 aa2.56□□□□□ -2
NCL-210ENST00000494618 PTBP2Q9UKA9 531 aaKnown RBP2.56□□□□□ -2
NCL-210ENST00000494618 CDH9Q9ULB4 789 aa2.56□□□□□ -2
NCL-210ENST00000494618 HIDE1A8MVS5 230 aa2.55□□□□□ -2
NCL-210ENST00000494618 CCL21O00585 134 aa2.55□□□□□ -2
NCL-210ENST00000494618 EIF3GO75821 320 aaKnown RBP eCLIP2.55□□□□□ -2
NCL-210ENST00000494618 IL4P05112 153 aa2.55□□□□□ -2
NCL-210ENST00000494618 OR56A5P0C7T3 313 aa2.55□□□□□ -2
NCL-210ENST00000494618 RORCP51449 518 aa2.55□□□□□ -2
NCL-210ENST00000494618 ZNF92Q03936 586 aa2.55□□□□□ -2
NCL-210ENST00000494618 OAFQ86UD1 273 aa2.55□□□□□ -2
NCL-210ENST00000494618 LRP11Q86VZ4 500 aa2.55□□□□□ -2
NCL-210ENST00000494618 OSR2Q8N2R0 312 aa2.55□□□□□ -2
NCL-210ENST00000494618 GATSQ8NAP1 163 aa2.55□□□□□ -2
NCL-210ENST00000494618 NECAP1Q8NC96 275 aa2.55□□□□□ -2
NCL-210ENST00000494618 GMCL1P1Q8NEA9 526 aa2.55□□□□□ -2
NCL-210ENST00000494618 OR2T3Q8NH03 318 aa2.55□□□□□ -2
NCL-210ENST00000494618 RNF139Q8WU17 664 aa2.55□□□□□ -2
NCL-210ENST00000494618 SCFD1Q8WVM8 642 aa2.55□□□□□ -2
NCL-210ENST00000494618 TRIM44Q96DX7 344 aaPredicted RBP2.55□□□□□ -2
NCL-210ENST00000494618 NARS2Q96I59 477 aaKnown RBP2.55□□□□□ -2
NCL-210ENST00000494618 MTMR9Q96QG7 549 aa2.55□□□□□ -2
NCL-210ENST00000494618 P2RX4Q99571 388 aa2.55□□□□□ -2
NCL-210ENST00000494618 TMEM59Q9BXS4 323 aa2.55□□□□□ -2
NCL-210ENST00000494618 ADAM28Q9UKQ2 775 aa2.55□□□□□ -2
NCL-210ENST00000494618 BLOC1S6Q9UL45 172 aa2.55□□□□□ -2
NCL-210ENST00000494618 PSG8Q9UQ74 426 aa2.55□□□□□ -2
NCL-210ENST00000494618 KIR2DS1A0A191URI9 304 aa2.54□□□□□ -2
NCL-210ENST00000494618 PCP4L1A6NKN8 68 aa2.54□□□□□ -2
NCL-210ENST00000494618 DYNC1I1O14576 645 aa2.54□□□□□ -2
NCL-210ENST00000494618 NCK1P16333 377 aa2.54□□□□□ -2
NCL-210ENST00000494618 HRH1P35367 487 aa2.54□□□□□ -2
NCL-210ENST00000494618 CDH4P55283 916 aa2.54□□□□□ -2
NCL-210ENST00000494618 PITPNAQ00169 270 aa2.54□□□□□ -2
NCL-210ENST00000494618 ZNF816Q0VGE8 651 aaPredicted RBP2.54□□□□□ -2
NCL-210ENST00000494618 KIR2DS1Q14954 304 aa2.54□□□□□ -2
NCL-210ENST00000494618 SLC25A24Q6NUK1 477 aa2.54□□□□□ -2
NCL-210ENST00000494618 LRRC74BQ6ZQY2 392 aa2.54□□□□□ -2
NCL-210ENST00000494618 DHDDSQ86SQ9 333 aa2.54□□□□□ -2
NCL-210ENST00000494618 LHFPL3Q86UP9 236 aa2.54□□□□□ -2
NCL-210ENST00000494618 PRSS58Q8IYP2 241 aa2.54□□□□□ -2
NCL-210ENST00000494618 TMEM54Q969K7 222 aa2.54□□□□□ -2
NCL-210ENST00000494618 FAM3DQ96BQ1 224 aa2.54□□□□□ -2
NCL-210ENST00000494618 IFT74Q96LB3 600 aa2.54□□□□□ -2
NCL-210ENST00000494618 CNN2Q99439 309 aaKnown RBP2.54□□□□□ -2
NCL-210ENST00000494618 SLC25A2Q9BXI2 301 aa2.54□□□□□ -2
NCL-210ENST00000494618 RPF2Q9H7B2 306 aaKnown RBP2.54□□□□□ -2
NCL-210ENST00000494618 NMRAL1Q9HBL8 299 aa2.54□□□□□ -2
NCL-210ENST00000494618 DDX19AQ9NUU7 478 aaKnown RBP2.54□□□□□ -2
NCL-210ENST00000494618 CTSFQ9UBX1 484 aa2.54□□□□□ -2
NCL-210ENST00000494618 ZNF233A6NK53 670 aa2.53□□□□□ -2
NCL-210ENST00000494618 ZNF850A8MQ14 1090 aa2.53□□□□□ -2
NCL-210ENST00000494618 GNAO1P09471 354 aa2.53□□□□□ -2
NCL-210ENST00000494618 C1GALT1C1LP0DN25 315 aa2.53□□□□□ -2
NCL-210ENST00000494618 CEACAM6P40199 344 aa2.53□□□□□ -2
NCL-210ENST00000494618 VHLP40337 213 aa2.53□□□□□ -2
NCL-210ENST00000494618 MAGEA8P43361 318 aa2.53□□□□□ -2
NCL-210ENST00000494618 FBXW4P57775 412 aa2.53□□□□□ -2
NCL-210ENST00000494618 PDK3Q15120 406 aa2.53□□□□□ -2
NCL-210ENST00000494618 CFAP157Q5JU67 520 aa2.53□□□□□ -2
NCL-210ENST00000494618 TEX43Q6ZNM6 134 aa2.53□□□□□ -2
NCL-210ENST00000494618 PPP1R42Q7Z4L9 355 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms