RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RIPPLY3P57055 190 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 SMIM11AP58511 58 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 RAP1BP61224 184 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 RAP1AP62834 184 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 ADIPOQQ15848 244 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 ZBED5Q49AG3 693 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 IGFN1Q86VF2 1251 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 OR4K5Q8NGD3 323 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 FNDC8Q8TC99 324 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 MCUR1Q96AQ8 359 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 MS4A3Q96HJ5 214 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 FAM46AQ96IP4 442 aaKnown RBP19.6■□□□□ 0.73
SNIP1-203ENST00000493916 NDEL1Q9GZM8 345 aa19.6■□□□□ 0.73
SNIP1-203ENST00000493916 GSX1Q9H4S2 264 aaPredicted RBP19.6■□□□□ 0.73
SNIP1-203ENST00000493916 KRCC1Q9NPI7 259 aaPredicted RBP19.6■□□□□ 0.73
SNIP1-203ENST00000493916 ZNF346Q9UL40 294 aaKnown RBP19.6■□□□□ 0.73
SNIP1-203ENST00000493916 HEATR1Q9H583 2144 aaKnown RBP19.6■□□□□ 0.73
SNIP1-203ENST00000493916 TRBV4-1A0A0J9YWV2 114 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 FAM171A2A8MVW0 826 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 DIRAS1O95057 198 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 SLC2A10O95528 541 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 ACVR1BP36896 505 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 OMPP47874 163 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 MRPS34P82930 218 aaKnown RBP19.59■□□□□ 0.73
SNIP1-203ENST00000493916 CD47Q08722 323 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 SEC23BQ15437 767 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 EFNB3Q15768 340 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 FGFBP3Q8TAT2 258 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 FBXO17Q96EF6 278 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 SH3GL3Q99963 347 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 ACTR3BQ9P1U1 418 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 UGT2A1Q9Y4X1 527 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 PMF1-BGLAPU3KQ54 211 aa19.59■□□□□ 0.73
SNIP1-203ENST00000493916 B9A039 149 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 FABP3P05413 133 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 OR4A8P0C604 315 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 T-ENOLP0DO92 83 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 ZNF35P13682 527 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 ZNF26P17031 533 aaPredicted RBP19.58■□□□□ 0.72
SNIP1-203ENST00000493916 SNRPD2P62316 118 aaKnown RBP19.58■□□□□ 0.72
SNIP1-203ENST00000493916 FMODQ06828 376 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 TNK1Q13470 666 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 RAB35Q15286 201 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 SLC36A2Q495M3 483 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 MTX3Q5HYI7 312 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 THEM4Q5T1C6 240 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 SLC25A47Q6Q0C1 308 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 ZNF584Q8IVC4 421 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 OR52J3Q8NH60 311 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 MUC13Q9H3R2 512 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 IL1RAPQ9NPH3 570 aa19.58■□□□□ 0.72
SNIP1-203ENST00000493916 SETD2Q9BYW2 2564 aaPredicted RBP19.57■□□□□ 0.72
SNIP1-203ENST00000493916 IGKV1D-43A0A0B4J1Z2 117 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SH3PXD2BA1X283 911 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SERPINA5P05154 406 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 CD14P08571 375 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 PATE4P0C8F1 98 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 NPR2P20594 1047 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 NR4A1P22736 598 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 THBS4P35443 961 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 NUDT6P53370 316 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SPIBQ01892 262 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 DAG1Q14118 895 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 RAB39AQ14964 217 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 TMEM53Q6P2H8 277 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 VHLLQ6RSH7 139 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 RINLQ6ZS11 566 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SLC16A14Q7RTX9 510 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 ARIH2OSQ8N7S6 290 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 HTRA1Q92743 480 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 NABP1Q96AH0 204 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 RBP7Q96R05 134 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 GPX7Q96SL4 187 aaPredicted RBP19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SMR3AQ99954 134 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 PLK3Q9H4B4 646 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SIAEQ9HAT2 523 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 FBXO9Q9UK97 447 aaPredicted RBP19.57■□□□□ 0.72
SNIP1-203ENST00000493916 SIGLEC7Q9Y286 467 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 ZANQ9Y493 2812 aa19.57■□□□□ 0.72
SNIP1-203ENST00000493916 VSTM5A8MXK1 200 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 PTP4A3O75365 173 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 GADD45GO95257 159 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 ATP6V1B2P21281 511 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 RPL4P36578 427 aaKnown RBP19.56■□□□□ 0.72
SNIP1-203ENST00000493916 ERVK-25P63136 954 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 SNTB2Q13425 540 aaKnown RBP19.56■□□□□ 0.72
SNIP1-203ENST00000493916 KRT80Q6KB66 452 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 FAM122BQ7Z309 247 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 RSRC1Q96IZ7 334 aaKnown RBP19.56■□□□□ 0.72
SNIP1-203ENST00000493916 C1orf21Q9H246 121 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 GRHPRQ9UBQ7 328 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 PRPF19Q9UMS4 504 aaKnown RBP19.56■□□□□ 0.72
SNIP1-203ENST00000493916 AURKCQ9UQB9 309 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 ADAM18Q9Y3Q7 739 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 SPEF1Q9Y4P9 236 aa19.56■□□□□ 0.72
SNIP1-203ENST00000493916 SMAD7O15105 426 aaKnown RBP19.55■□□□□ 0.72
SNIP1-203ENST00000493916 SSX4O60224 188 aa19.55■□□□□ 0.72
SNIP1-203ENST00000493916 NDUFB2O95178 105 aa19.55■□□□□ 0.72
SNIP1-203ENST00000493916 MMP7P09237 267 aaPredicted RBP19.55■□□□□ 0.72
SNIP1-203ENST00000493916 EFNA4P52798 201 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms