RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 LYPD4Q6UWN0 246 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 C9orf62Q8N4C0 152 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 RFLNBQ8N5W9 214 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 HSD17B8Q92506 261 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 GHITMQ9H3K2 345 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 MRPL39Q9NYK5 338 aaKnown RBP20.48■□□□□ 0.87
USF3-203ENST00000491165 WDPCPO95876 746 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 CCL3P10147 92 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 PTGDSP41222 190 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ACTA2P62736 377 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ACTG2P63267 376 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 TP53I3Q53FA7 332 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ALG10BQ5I7T1 473 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ABHD17BQ5VST6 288 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 RNF138Q8WVD3 245 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ZCCHC14Q8WYQ9 949 aaKnown RBP20.48■□□□□ 0.87
USF3-203ENST00000491165 YIPF5Q969M3 257 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 SMIM19Q96E16 107 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ERMAPQ96PL5 475 aaPredicted RBP20.48■□□□□ 0.87
USF3-203ENST00000491165 TTTY10Q9BZA0 68 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 TRIM2Q9C040 744 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 SH2D2AQ9NP31 389 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 CLEC4AQ9UMR7 237 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ING4Q9UNL4 249 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 ITPR1Q14643 2758 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 OGG1O15527 345 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 OIP5O43482 229 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 ARL6IP5O75915 188 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 NGFRP08138 427 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 ATF1P18846 271 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 GDI2P50395 445 aaKnown RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 MMP15P51511 669 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 FHL1Q13642 323 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 INPP5JQ15735 1006 aaPredicted RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 PRAMEF20Q5VT98 475 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 CBLN3Q6UW01 205 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 GRAMD2AQ8IUY3 354 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 OR52E2Q8NGJ4 325 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 ZMYND19Q96E35 227 aaPredicted RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 SIGLEC12Q96PQ1 595 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 EMC7Q9NPA0 242 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 HPF1Q9NWY4 346 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 TEKT2Q9UIF3 430 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 SERINC4A6NH21 518 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 TCRBP04435 133 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 CD3GP09693 182 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 EPXP11678 715 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 SNRPBP14678 240 aaKnown RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 CD96P40200 585 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 GBX2P52951 348 aaPredicted RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 CRYZQ08257 329 aaKnown RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 C19orf57Q0VDD7 668 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 CDK5R1Q15078 307 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 SPINK14Q6IE38 97 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 NUP54Q7Z3B4 507 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 SYS1Q8N2H4 156 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 FAM98AQ8NCA5 519 aaKnown RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 CNN2Q99439 309 aaKnown RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 PROK2Q9HC23 129 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 DNAJB12Q9NXW2 375 aaKnown RBP20.47■□□□□ 0.87
USF3-203ENST00000491165 COPZ2Q9P299 210 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 CSAG2Q9Y5P2 127 aa20.47■□□□□ 0.87
USF3-203ENST00000491165 PIEZO2Q9H5I5 2752 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 A0A087WV48 116 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 ALG1L2C9J202 215 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 SCDO00767 359 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 TFP02787 698 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 OR2T7P0C7T2 308 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 ACAA2P42765 397 aaKnown RBP20.46■□□□□ 0.87
USF3-203ENST00000491165 HCCSP53701 268 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 SIAH3Q8IW03 269 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 POMGNT2Q8NAT1 580 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 SDR9C7Q8NEX9 313 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 OR2T27Q8NH04 317 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 PELI1Q96FA3 418 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 BRD7Q9NPI1 651 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 CHRNA9Q9UGM1 479 aa20.46■□□□□ 0.87
USF3-203ENST00000491165 TEX13CA0A0J9YWL9 993 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 A0A1W2PPK0 400 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 LRRN3E7EW58 273 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 CEACAM4O75871 244 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 NEURL1O76050 574 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 HPGDP15428 266 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 DGCR2P98153 550 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 RNASE12Q5GAN4 147 aaKnown RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 OR5M10Q6IEU7 315 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 BAIAP2L2Q6UXY1 529 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 ZNF782Q6ZMW2 699 aaPredicted RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 LRRC69Q6ZNQ3 347 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 OR11H7Q8NGC8 314 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 OR4K13Q8NH42 304 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 PHOSPHO1Q8TCT1 267 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 HAVCR2Q8TDQ0 301 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 TTC9Q92623 222 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 ZNF524Q96C55 264 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 ZFP3Q96NJ6 502 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 OR2M2Q96R28 347 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 ZCCHC4Q9H5U6 513 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 RANBP3Q9H6Z4 567 aaPredicted RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 ZNF222Q9UK12 451 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms