RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 USH1CQ9Y6N9 552 aa2.31□□□□□ -2.04
EPB41-212ENST00000490308 DENND4BO75064 1496 aaPredicted RBP2.31□□□□□ -2.04
EPB41-212ENST00000490308 HECW1Q76N89 1606 aa2.31□□□□□ -2.04
EPB41-212ENST00000490308 COL22A1Q8NFW1 1626 aaPredicted RBP2.31□□□□□ -2.04
EPB41-212ENST00000490308 KIF21AQ7Z4S6 1674 aa2.31□□□□□ -2.04
EPB41-212ENST00000490308 TRABD2BA6NFA1 517 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 DBX1A6NMT0 343 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 EFCAB7A8K855 629 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ZNF724A8MTY0 619 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 E9PLD3 99 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 PDHXO00330 501 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 MGST3O14880 152 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 UBDO15205 165 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ACOX3O15254 700 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 EFNA2O43921 213 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 HPGDSO60760 199 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 EIF3GO75821 320 aaKnown RBP eCLIP2.3□□□□□ -2.04
EPB41-212ENST00000490308 TDP2O95551 362 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 C1orf105O95561 183 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 SNAP29O95721 258 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CLIC3O95833 236 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 HPRT1P00492 218 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 IGHV2-5P01817 119 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 TNNC2P02585 160 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ORM1P02763 201 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 IFNA6P05013 189 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 SERPINA5P05154 406 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 RETP07949 1114 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 OR9G9P0C7N8 305 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 PVRP15151 417 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CELP19835 753 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 PROZP22891 400 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 F8A1P23610 371 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 IGFBP5P24593 272 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 HMGCLP35914 325 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ARL2P36404 184 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 BTDP43251 543 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 MAGEA3P43357 314 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 RFX5P48382 616 aaPredicted RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 RPL14P50914 215 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 PAX9P55771 341 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 XGP55808 180 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 UBE2KP61086 200 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 RHOAP61586 193 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 RPS15AP62244 130 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 RPS27AP62979 156 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 SRPXP78539 464 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 HMGCS1Q01581 520 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 SP4Q02446 784 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ZNF33BQ06732 778 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CKAP4Q07065 602 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 SIGLEC14Q08ET2 396 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 TWF1Q12792 350 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 PDIA2Q13087 525 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 SERTAD2Q14140 314 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 KCNJ11Q14654 390 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CLINT1Q14677 625 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 NFATC4Q14934 902 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ZNHIT3Q15649 155 aaPredicted RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 EXOC3L4Q17RC7 722 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 RFX4Q33E94 735 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 TTLL9Q3SXZ7 439 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 VWA2Q5GFL6 755 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 TECRLQ5HYJ1 363 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 MARCH8Q5T0T0 291 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CPTPQ5TA50 214 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 RNLSQ5VYX0 342 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 APOBEC3HQ6NTF7 200 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 TRIM40Q6P9F5 258 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ZNF782Q6ZMW2 699 aaPredicted RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 LCNL1Q6ZST4 164 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 LINC00336Q6ZUF6 198 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 YTHDF3Q7Z739 585 aaKnown RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 NFE4Q86UQ8 179 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 SLC13A5Q86YT5 568 aaPredicted RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 FUNDC1Q8IVP5 155 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 PGAM4Q8N0Y7 254 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CYP4Z2PQ8N1L4 340 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 FTMTQ8N4E7 242 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 TMEM251Q8N6I4 163 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 NANOGP1Q8N7R0 232 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 ACOT4Q8N9L9 421 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CDRT4Q8N9R6 151 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 CCDC71LQ8N9Z2 235 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 OR6Q1Q8NGQ2 317 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 OR1S2Q8NGQ3 325 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 OR2A1Q8NGT9 310 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 OR9A4Q8NGU2 314 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 OR2Y1Q8NGV0 311 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 SECTM1Q8WVN6 248 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 TFGQ92734 400 aaPredicted RBP2.3□□□□□ -2.04
EPB41-212ENST00000490308 PAGE5Q96GU1 130 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 MS4A14Q96JA4 679 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 C20orf173Q96LM9 149 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 HBEGFQ99075 208 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 HIST1H4GQ99525 98 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 SH3GL3Q99963 347 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 APOL4Q9BPW4 351 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 NICN1Q9BSH3 213 aa2.3□□□□□ -2.04
EPB41-212ENST00000490308 BEX2Q9BXY8 128 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms