RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■□□□□ 9.9
TRIM50-203ENST00000488217 IQCMA0A1B0GVH7 501 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 A0A1W2PRG6 482 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 FAM157AC9JC47 383 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 TFP02787 698 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 LCKP06239 509 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 MSMBP08118 114 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 VIMP08670 466 aaKnown RBP13.1□□□□□ -0.31
TRIM50-203ENST00000488217 GAAP10253 952 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 SAGP10523 405 aaPredicted RBP13.1□□□□□ -0.31
TRIM50-203ENST00000488217 ITGA2P17301 1181 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 PCGF2P35227 344 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 MAGEB1P43366 347 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 CLRN1P58418 232 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 LMO4P61968 165 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 RUNX1T1Q06455 604 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 CYLC2Q14093 348 aaPredicted RBP13.1□□□□□ -0.31
TRIM50-203ENST00000488217 VMACQ2NL98 169 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 PCGF3Q3KNV8 242 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 MMEL1Q495T6 779 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 METTL21CQ5VZV1 264 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 TMEM154Q6P9G4 183 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 RINLQ6ZS11 566 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 MAGEB18Q96M61 343 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 ZNF347Q96SE7 839 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 BCL2L14Q9BZR8 327 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 METTL17Q9H7H0 456 aaPredicted RBP13.1□□□□□ -0.31
TRIM50-203ENST00000488217 SH3GLB1Q9Y371 365 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 NBEAL1Q6ZS30 2694 aa13.1□□□□□ -0.31
TRIM50-203ENST00000488217 IGLV3-9A0A075B6K5 115 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 A0A0A6YYJ9 748 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 CENPBD1B2RD01 187 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 CDC14BO60729 498 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 RP2O75695 350 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 NCR1O76036 304 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 SNAP29O95721 258 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 MT-ND1P03886 318 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 F13BP05160 661 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 ANPEPP15144 967 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 ACADSP16219 412 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 CRYBB2P43320 205 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 ZNF84P51523 738 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 UGT2B15P54855 530 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 KLF3P57682 345 aaPredicted RBP13.09□□□□□ -0.31
TRIM50-203ENST00000488217 CCL8P80075 99 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 MYBPC1Q00872 1141 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 TBC1D28Q2M2D7 210 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 NANOGP8Q6NSW7 305 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 FAHD2BQ6P2I3 314 aaPredicted RBP13.09□□□□□ -0.31
TRIM50-203ENST00000488217 DEF8Q6ZN54 512 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 FAHD2AQ96GK7 314 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 LRRC37BQ96QE4 947 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 TSPAN32Q96QS1 320 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 SEPHS2Q99611 448 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 KCNN2Q9H2S1 579 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 OR51B6Q9H340 312 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 LPAR2Q9HBW0 351 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
TRIM50-203ENST00000488217 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
TRIM50-203ENST00000488217 MMP7P09237 267 aaPredicted RBP13.08□□□□□ -0.32
TRIM50-203ENST00000488217 AQP2P41181 271 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 CRYBA2P53672 197 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 RPL18Q07020 188 aaKnown RBP13.08□□□□□ -0.32
TRIM50-203ENST00000488217 LAPTM4AQ15012 233 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 LRRC18Q8N456 261 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.32
TRIM50-203ENST00000488217 CPEB3Q8NE35 698 aaKnown RBP13.08□□□□□ -0.32
TRIM50-203ENST00000488217 OR51F2Q8NH61 342 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 SNX33Q8WV41 574 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 ECSITQ9BQ95 431 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 INIPQ9NRY2 104 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 DECR2Q9NUI1 292 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 RIMS3Q9UJD0 308 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 BAG5Q9UL15 447 aa13.08□□□□□ -0.32
TRIM50-203ENST00000488217 TRAV20A0A0B4J274 112 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 MCIDASD6RGH6 385 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 OR7A10O76100 309 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 VENTXO95231 258 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 IGF2P01344 180 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 DRD4P21917 467 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 CCNOP22674 350 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 APLNRP35414 380 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 RBM34P42696 430 aaKnown RBP13.07□□□□□ -0.32
TRIM50-203ENST00000488217 DAP3P51398 398 aaKnown RBP13.07□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF133P52736 654 aaPredicted RBP13.07□□□□□ -0.32
TRIM50-203ENST00000488217 TAS2R41P59536 307 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 TEKQ02763 1124 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 SCGB2A2Q13296 93 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 PIN1Q13526 163 aaPredicted RBP13.07□□□□□ -0.32
TRIM50-203ENST00000488217 ARMC4Q5T2S8 1044 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms