RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 LSP1P33241 339 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 TOP3AQ13472 1001 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 COQ5Q5HYK3 327 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 TMEM53Q6P2H8 277 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 VTCN1Q7Z7D3 282 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 IGFN1Q86VF2 1251 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 ICA1LQ8NDH6 482 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 ZNF540Q8NDQ6 660 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 SLC30A7Q8NEW0 376 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 ASB10Q8WXI3 467 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 NSMAFQ92636 917 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 SNX18Q96RF0 628 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 NARFLQ9H6Q4 476 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 CDH20Q9HBT6 801 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 CMTM6Q9NX76 183 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 MED31Q9Y3C7 131 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 SNX13Q9Y5W8 968 aa9.72□□□□□ -0.85
NIPAL3-207ENST00000488155 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.85
NIPAL3-207ENST00000488155 IGKV1D-43A0A0B4J1Z2 117 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 A0A1W2PPW3 197 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 ELOVL7A1L3X0 281 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 J3KTA2 159 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 LILRA1O75019 489 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 CLPTM1O96005 669 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 NPPAP01160 153 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 HPXP02790 462 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 LCKP06239 509 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 NAT2P11245 290 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 IFI30P13284 250 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 CCNOP22674 350 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 COL8A2P25067 703 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 APEX1P27695 318 aaKnown RBP9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 RBM34P42696 430 aaKnown RBP9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF84P51523 738 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 ERVS71-1P61550 626 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 SELENOWP63302 87 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 FMODQ06828 376 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 CD47Q08722 323 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 CCNIQ14094 377 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 SGCAQ16586 387 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 FXNQ16595 210 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 FAM120AOSQ5T036 256 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 RGS7BPQ6MZT1 257 aaPredicted RBP9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF786Q8N393 782 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 CLDN22Q8N7P3 220 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 HDAC2Q92769 488 aaKnown RBP9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 TSPAN32Q96QS1 320 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 DENND2DQ9H6A0 471 aaPredicted RBP9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 SLC7A8Q9UHI5 535 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 FBXO9Q9UK97 447 aaPredicted RBP9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 A4GNTQ9UNA3 340 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 TANC2Q9HCD6 1990 aa9.71□□□□□ -0.86
NIPAL3-207ENST00000488155 GMNCA6NCL1 334 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 PHF1O43189 567 aaPredicted RBP9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF682O95780 498 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 SRD5A1P18405 259 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 GIFP27352 417 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 DAP3P51398 398 aaKnown RBP9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 CTXN1P60606 82 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 RPS23P62266 143 aaKnown RBP9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 HSF2Q03933 536 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 LIPEQ05469 1076 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 ST3GAL3Q11203 375 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 HIST3H3Q16695 136 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 NKPD1Q17RQ9 610 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 CR1LQ2VPA4 569 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 SLC36A2Q495M3 483 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 PHC2Q8IXK0 858 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 NRMQ8IXM6 262 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 SLC15A3Q8IY34 581 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 RBM15BQ8NDT2 890 aaKnown RBP9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 OR51A7Q8NH64 312 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 SPATA3Q8NHX4 192 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 PRRC1Q96M27 445 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 MRPL13Q9BYD1 178 aaKnown RBP9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 MS4A5Q9H3V2 200 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 MRGBPQ9NV56 204 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 TMEM160Q9NX00 188 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 TAAR3PQ9P1P4 343 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 LPAR3Q9UBY5 353 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 FBXL3Q9UKT7 428 aa9.7□□□□□ -0.86
NIPAL3-207ENST00000488155 TRAV27A0A087WT01 109 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 IQCMA0A1B0GVH7 501 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 CXCR6O00574 342 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 GSTA4O15217 222 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 NCR1O76036 304 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 SAGP10523 405 aaPredicted RBP9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 COX4I1P13073 169 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 MAKP20794 623 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 IFNA8P32881 189 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 MAGEB1P43366 347 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 EVX1P49640 407 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 SLC7A2P52569 658 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 CHN2P52757 468 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 GLO1Q04760 184 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 PLP2Q04941 152 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 RIN1Q13671 783 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 TBC1D28Q2M2D7 210 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms