RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 HSD17B1P14061 328 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 RHCEP18577 417 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 RPL4P36578 427 aaKnown RBP20.51■□□□□ 0.87
RNF38-208ENST00000488058 SLC9A3P48764 834 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 VLDLRP98155 873 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 GALK2Q01415 458 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 TAF11Q15544 211 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 EFNB3Q15768 340 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 SLC36A2Q495M3 483 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 GKAP1Q5VSY0 366 aaPredicted RBP20.51■□□□□ 0.87
RNF38-208ENST00000488058 PODNL1Q6PEZ8 512 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 SVOPLQ8N434 492 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 ANKS4BQ8N8V4 417 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 FAM46AQ96IP4 442 aaKnown RBP20.51■□□□□ 0.87
RNF38-208ENST00000488058 NSMCE2Q96MF7 247 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 SORCS2Q96PQ0 1159 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 GORASP2Q9H8Y8 452 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 NDE1Q9NXR1 346 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 SPEF1Q9Y4P9 236 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 FKBP7Q9Y680 259 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 CR1P17927 2039 aa20.51■□□□□ 0.87
RNF38-208ENST00000488058 SH3PXD2BA1X283 911 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 CDC42EP2O14613 210 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 NR2C1P13056 603 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 HOXB4P17483 251 aaPredicted RBP20.5■□□□□ 0.87
RNF38-208ENST00000488058 NR4A1P22736 598 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 CDAP32320 146 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 ANKDD1AQ495B1 522 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 C10orf128Q5T292 105 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 CLDN22Q8N7P3 220 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 LRRC75AQ8NAA5 344 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 OR52J3Q8NH60 311 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 SLC7A13Q8TCU3 470 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 POM121Q96HA1 1249 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 PYURFQ96I23 114 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 C7orf34Q96L11 122 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 TSPAN32Q96QS1 320 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 KCNK17Q96T54 332 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 PLK3Q9H4B4 646 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 CD300AQ9UGN4 299 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 TMEM5Q9Y2B1 443 aa20.5■□□□□ 0.87
RNF38-208ENST00000488058 IGKV1D-43A0A0B4J1Z2 117 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 ARPC2O15144 300 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 IGHMP01871 453 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 SERPINA5P05154 406 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 ZNF35P13682 527 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 DSCR9P59020 149 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 ERVK-25P63136 954 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 SGCAQ16586 387 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 ZBED5Q49AG3 693 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 TMPRSS11FQ6ZWK6 438 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 FAM168AQ92567 244 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 RBP7Q96R05 134 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 ALG12Q9BV10 488 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 KCNN2Q9H2S1 579 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 DYNLRB1Q9NP97 96 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 CMAHPQ9Y471 501 aa20.49■□□□□ 0.87
RNF38-208ENST00000488058 A0A1W2PRQ8 180 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 A6NIZ1 184 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 GPRIN2O60269 458 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 F12P00748 615 aaPredicted RBP20.48■□□□□ 0.87
RNF38-208ENST00000488058 ITGA2P17301 1181 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 PCSK6P29122 969 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 ZNF133P52736 654 aaPredicted RBP20.48■□□□□ 0.87
RNF38-208ENST00000488058 RAP1BP61224 184 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 RAP1AP62834 184 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 FHL1Q13642 323 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 DGCR6Q14129 220 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 CARTPTQ16568 116 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 FAM205BPQ63HN1 556 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 DPPA2Q7Z7J5 298 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 ZNF584Q8IVC4 421 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 FITM2Q8N6M3 262 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 SLC30A7Q8NEW0 376 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 MCUR1Q96AQ8 359 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 NDEL1Q9GZM8 345 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 SMURF2Q9HAU4 748 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 CCNB1IP1Q9NPC3 277 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 AURKCQ9UQB9 309 aa20.48■□□□□ 0.87
RNF38-208ENST00000488058 TRBV4-1A0A0J9YWV2 114 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 H7C1C5 153 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 CCL2P13500 99 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 PPOXP50336 477 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 MNAT1P51948 309 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 LCN6P62502 163 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 MRPS34P82930 218 aaKnown RBP20.47■□□□□ 0.87
RNF38-208ENST00000488058 SPIBQ01892 262 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 PLP2Q04941 152 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 FXNQ16595 210 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 NRN1LQ496H8 165 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 SLC25A47Q6Q0C1 308 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 CCDC197Q8NCU1 140 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 OR10H5Q8NGA6 315 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 ZNF519Q8TB69 540 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 NMD3Q96D46 503 aaKnown RBP20.47■□□□□ 0.87
RNF38-208ENST00000488058 OR51B6Q9H340 312 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 CDH20Q9HBT6 801 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 KRCC1Q9NPI7 259 aaPredicted RBP20.47■□□□□ 0.87
RNF38-208ENST00000488058 GRHPRQ9UBQ7 328 aa20.47■□□□□ 0.87
RNF38-208ENST00000488058 ADAM18Q9Y3Q7 739 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms