RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 OPN3Q9H1Y3 402 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-227ENST00000486806 PIGMQ9H3S5 423 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 Q9H521 79 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 CRLF2Q9HC73 371 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 GPR35Q9HC97 309 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 ASB6Q9NWX5 421 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 DNAJC27Q9NZQ0 273 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 JKAMPQ9P055 326 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 AASSQ9UDR5 926 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 PROCRQ9UNN8 238 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 B9D1Q9UPM9 204 aa8.44□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF587BE7ETH6 402 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 MSTNO14793 375 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 LRRTM2O43300 516 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 DHHO43323 396 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 SLC16A7O60669 478 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 ENTPD6O75354 484 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 GYPBP06028 91 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 ITGA5P08648 1049 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 BMP5P22003 454 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 HTR1FP30939 366 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 ROR2Q01974 943 aaKnown RBP8.43□□□□□ -1.06
MCF2L-227ENST00000486806 CDK5R2Q13319 367 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 GGTLC2Q14390 218 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 ETFDHQ16134 617 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 SMN1Q16637 294 aaKnown RBP8.43□□□□□ -1.06
MCF2L-227ENST00000486806 NRN1LQ496H8 165 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 SLC35D3Q5M8T2 416 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 MTFR2Q6P444 385 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF474Q6S9Z5 364 aaPredicted RBP8.43□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF627Q7L945 461 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 MRGPRGQ86SM5 289 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 PROKR2Q8NFJ6 384 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 NABP1Q96AH0 204 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 CNBD2Q96M20 576 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 RBP7Q96R05 134 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 B3GAT2Q9NPZ5 323 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 UBAP1Q9NZ09 502 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
MCF2L-227ENST00000486806 SVILO95425 2214 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 CHD6Q8TD26 2715 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 SH3D21A4FU49 640 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 SLC22A31A6NKX4 558 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 A8MXE2 369 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF99A8MXY4 864 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 DVL2O14641 736 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 KHDRBS3O75525 346 aaKnown RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 GLCEO94923 617 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 IGHV1-2P23083 117 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 MPGP29372 298 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 GSTT1P30711 240 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 CHRNB4P30926 498 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 PYCR1P32322 319 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 CDH11P55287 796 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 FOXG1P55316 489 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 GLO1Q04760 184 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF91Q05481 1191 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 FAPQ12884 760 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 APOFQ13790 326 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 CEACAM16Q2WEN9 425 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 LYPD4Q6UWN0 246 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 MEPCEQ7L2J0 689 aaKnown RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 ABHD12BQ7Z5M8 362 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 UBE2J2Q8N2K1 259 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF610Q8N9Z0 462 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 SLC26A10Q8NG04 563 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 OR51L1Q8NGJ5 315 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 NSMAFQ92636 917 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 OTULINQ96BN8 352 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 BOD1Q96IK1 185 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 Q96MT0 163 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 FOXB1Q99853 325 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 OR51V1Q9H2C8 321 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 NELFAQ9H3P2 528 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 MARCH7Q9H992 704 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 TMEM38BQ9NVV0 291 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 MRPL22Q9NWU5 206 aaKnown RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 CLN6Q9NWW5 311 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 HAO2Q9NYQ3 351 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 TAS2R16Q9NYV7 291 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 UPB1Q9UBR1 384 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 MOKQ9UQ07 419 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 LRCH1Q9Y2L9 728 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 COA3Q9Y2R0 106 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-227ENST00000486806 COMMD3-BMI1R4GMX3 469 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 DOCK7Q96N67 2140 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 FAM208BQ5VWN6 2430 aa8.42□□□□□ -1.06
MCF2L-227ENST00000486806 ZNF462Q96JM2 2506 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 FAM171A2A8MVW0 826 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 EEF1E1-BLOC1S5C9J1V9 151 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 EEF1E1O43324 174 aaKnown RBP8.41□□□□□ -1.06
MCF2L-227ENST00000486806 KRT33AO76009 404 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 GPANK1O95872 356 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 TFP02787 698 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 HRGP04196 525 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 SCG5P05408 212 aa8.41□□□□□ -1.06
MCF2L-227ENST00000486806 DBTP11182 482 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms