RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ZNF184Q99676 751 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 TEX12Q9BXU0 123 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 SLCO5A1Q9H2Y9 848 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 SRA1Q9HD15 236 aaKnown RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 HINT3Q9NQE9 182 aaKnown RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 PROCRQ9UNN8 238 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 DOCK7Q96N67 2140 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 CACNA1CQ13936 2221 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ARHGAP21Q5T5U3 1957 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 NF1P21359 2839 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 RIIAD1A6NNX1 92 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 FAM171A2A8MVW0 826 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 CENPBD1B2RD01 187 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 DCTN6O00399 190 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 AHCYL1O43865 530 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 RENP00797 406 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 CLUP10909 449 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 GABRB1P18505 474 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 BMP5P22003 454 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 OPRM1P35372 400 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 CDC42P60953 191 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 CD47Q08722 323 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 PLBD1Q6P4A8 553 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 HDDC2Q7Z4H3 204 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 MRGPRGQ86SM5 289 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 ENTHD1Q8IYW4 607 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 OR6V1Q8N148 313 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 BBS1Q8NFJ9 593 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 OR9Q1Q8NGQ5 310 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 TMEM163Q8TC26 289 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 OTULINQ96BN8 352 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 PLEKHA8Q96JA3 519 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 LURAP1Q96LR2 239 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 RBP7Q96R05 134 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 SNX18Q96RF0 628 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 NMNAT2Q9BZQ4 307 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 NUAK2Q9H093 628 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 SYT4Q9H2B2 425 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 GPR35Q9HC97 309 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 RPRD1BQ9NQG5 326 aaKnown RBP11.26□□□□□ -0.61
HDAC6-229ENST00000486665 RASSF1Q9NS23 344 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 ASB6Q9NWX5 421 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF629Q9UEG4 869 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-229ENST00000486665 B9D1Q9UPM9 204 aa11.26□□□□□ -0.61
HDAC6-229ENST00000486665 PHF3Q92576 2039 aaKnown RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 SLC16A7O60669 478 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 SMNDC1O75940 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 GYPBP06028 91 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 CD8BP10966 210 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 CTLA4P16410 223 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF3P17036 446 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 PYCR1P32322 319 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 HSPA13P48723 471 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 SLC25A1P53007 311 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 ISL1P61371 349 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 SNRPGP62308 76 aaKnown RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 FAPQ12884 760 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 THEM4Q5T1C6 240 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 AADACL4Q5VUY2 407 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 FBXW9Q5XUX1 488 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF474Q6S9Z5 364 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 CXXC5Q7LFL8 322 aaKnown RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 UBE2J2Q8N2K1 259 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 POMGNT2Q8NAT1 580 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 RELL2Q8NC24 303 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 OR51L1Q8NGJ5 315 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 TRUB1Q8WWH5 349 aaKnown RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 NSMAFQ92636 917 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 FOXN4Q96NZ1 517 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 ULBP2Q9BZM5 246 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 RERGLQ9H628 205 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 IMPAD1Q9NX62 359 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 UPB1Q9UBR1 384 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 RAB26Q9ULW5 256 aa11.25□□□□□ -0.61
HDAC6-229ENST00000486665 KLF2Q9Y5W3 355 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-229ENST00000486665 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 OR6C65A6NJZ3 312 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 A8MXE2 369 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 PRR23D1E9PI22 279 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 DHHO43323 396 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 ENTPD6O75354 484 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 KRT33AO76009 404 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 GPANK1O95872 356 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 SCG5P05408 212 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 PRR23D2P0DMB1 279 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 SPI1P17947 270 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 IL5RAQ01344 420 aa11.24□□□□□ -0.61
HDAC6-229ENST00000486665 ROR2Q01974 943 aaKnown RBP11.24□□□□□ -0.61
HDAC6-229ENST00000486665 IL18R1Q13478 541 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms