RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 SIRPAP78324 504 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 TMED1Q13445 227 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 GUSBP1Q15486 140 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 KCTD21Q4G0X4 260 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 LRFN4Q6PJG9 635 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 CNEP1R1Q8N9A8 125 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 OR51G2Q8NGK0 314 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 FOXN4Q96NZ1 517 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 ALKBH3Q96Q83 286 aaPredicted RBP16.8■□□□□ 0.28
PCCB-216ENST00000483687 B3GAT2Q9NPZ5 323 aa16.8■□□□□ 0.28
PCCB-216ENST00000483687 COA3Q9Y2R0 106 aaPredicted RBP16.8■□□□□ 0.28
PCCB-216ENST00000483687 EFCAB10A6NFE3 127 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 KHDRBS3O75525 346 aaKnown RBP16.79■□□□□ 0.28
PCCB-216ENST00000483687 KRT33AO76009 404 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 TOXO94900 526 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 APOL3O95236 402 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 IGHV3-9P01782 118 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 TIMP3P35625 211 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 SLC15A1P46059 708 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 SLC35A2P78381 396 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 GLO1Q04760 184 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 LINC01590Q5TEZ4 76 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 TSPO2Q5TGU0 170 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 TTYH2Q9BSA4 534 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 COPS4Q9BT78 406 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 ZNF696Q9H7X3 374 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 PAK1IP1Q9NWT1 392 aaPredicted RBP16.79■□□□□ 0.28
PCCB-216ENST00000483687 HAO2Q9NYQ3 351 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 CNOT2Q9NZN8 540 aaKnown RBP16.79■□□□□ 0.28
PCCB-216ENST00000483687 POLEQ07864 2286 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 NBASA2RRP1 2371 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 OR6C65A6NJZ3 312 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 GPANK1O95872 356 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 HLA-DQA2P01906 255 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 CASP6P55212 293 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 GABARAPL2P60520 117 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 RAB40BQ12829 278 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 FOXF2Q12947 444 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 KLHL22Q53GT1 634 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 LYPD4Q6UWN0 246 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 IPCEF1Q8WWN9 437 aaPredicted RBP16.79■□□□□ 0.28
PCCB-216ENST00000483687 SGCDQ92629 289 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 LGALS12Q96DT0 336 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 DUSP21Q9H596 190 aa16.79■□□□□ 0.28
PCCB-216ENST00000483687 MAGEA13PA6NCF6 341 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 MRPL3P09001 348 aaKnown RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 GLI4P10075 376 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 PIPP12273 146 aaPredicted RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 KIR2DL2P43627 348 aaPredicted RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 ST3GAL4Q11206 333 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 POU4F2Q12837 409 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 EIF2S3LQ2VIR3 472 aaKnown RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 C10orf128Q5T292 105 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 RIPPLY2Q5TAB7 128 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 SHFQ7M4L6 423 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 GLB1L2Q8IW92 636 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 UBE2J2Q8N2K1 259 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 STX19Q8N4C7 294 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 POMGNT2Q8NAT1 580 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 ZNF511Q8NB15 262 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 OR4F15Q8NGB8 312 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 ZFP3Q96NJ6 502 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 RBM24Q9BX46 236 aaKnown RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 LINC00470Q9BZP3 86 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 CRLF2Q9HC73 371 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 CCNB1IP1Q9NPC3 277 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 SLC7A10Q9NS82 523 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 MRPS18AQ9NVS2 196 aaKnown RBP16.78■□□□□ 0.28
PCCB-216ENST00000483687 FKBP14Q9NWM8 211 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 UPB1Q9UBR1 384 aa16.78■□□□□ 0.28
PCCB-216ENST00000483687 TRGV8A0A0C4DH27 118 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 A0A1W2PPL8 197 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 IRGMA1A4Y4 181 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 TVP23AA6NH52 213 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 EIF4E1BA6NMX2 242 aaKnown RBP16.77■□□□□ 0.28
PCCB-216ENST00000483687 OR3A2P47893 321 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 ZNF133P52736 654 aaPredicted RBP16.77■□□□□ 0.28
PCCB-216ENST00000483687 BLVRAP53004 296 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 CDH15P55291 814 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 PIGFQ07326 219 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 GGTLC2Q14390 218 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 VWA1Q6PCB0 445 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 NAXEQ8NCW5 288 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 OR6K3Q8NGY3 331 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 MYDGFQ969H8 173 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 CNN2Q99439 309 aaKnown RBP16.77■□□□□ 0.28
PCCB-216ENST00000483687 ADGRL4Q9HBW9 690 aa16.77■□□□□ 0.28
PCCB-216ENST00000483687 ZFYVE26Q68DK2 2539 aa16.77■□□□□ 0.27
PCCB-216ENST00000483687 DHHO43323 396 aa16.76■□□□□ 0.27
PCCB-216ENST00000483687 RGS10O43665 173 aa16.76■□□□□ 0.27
PCCB-216ENST00000483687 FADS2O95864 444 aaKnown RBP16.76■□□□□ 0.27
PCCB-216ENST00000483687 CRHP06850 196 aa16.76■□□□□ 0.27
PCCB-216ENST00000483687 STSP08842 583 aa16.76■□□□□ 0.27
PCCB-216ENST00000483687 SBK2P0C263 348 aa16.76■□□□□ 0.27
PCCB-216ENST00000483687 NAA10P41227 235 aaPredicted RBP16.76■□□□□ 0.27
PCCB-216ENST00000483687 PMPCAQ10713 525 aa16.76■□□□□ 0.27
PCCB-216ENST00000483687 ERI1Q8IV48 349 aaKnown RBP16.76■□□□□ 0.27
PCCB-216ENST00000483687 OR52I1Q8NGK6 324 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms