RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 FARSAQ9Y285 508 aaKnown RBP10.73□□□□□ -0.69
VTI1A-205ENST00000483122 CSAG2Q9Y5P2 127 aa10.73□□□□□ -0.69
VTI1A-205ENST00000483122 OBSL1O75147 1896 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 LOC100509620A0A075B734 347 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 TRBV5-5A0A0J9YX44 114 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 A0A1B0GV90 55 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 GPR37O15354 613 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 CD14P08571 375 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF28P17035 718 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 PAX6P26367 422 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 BCL6P41182 706 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 PLAURQ03405 335 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ALKBH1Q13686 389 aaKnown RBP10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ARHGAP11BQ3KRB8 267 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 GXYLT1Q4G148 440 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 NCMAPQ5T1S8 102 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF684Q5T5D7 378 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ARHGAP40Q5TG30 622 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 CDPF1Q6NVV7 123 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF614Q8N883 585 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 LINC01555Q8NAE3 123 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 OR4K17Q8NGC6 315 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 OR2L2Q8NH16 312 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF461Q8TAF7 563 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 NUDCD2Q8WVJ2 157 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 DCUN1D4Q92564 292 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 CCDC74AQ96AQ1 378 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 MS4A6EQ96DS6 147 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 SEH1LQ96EE3 360 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 RRNAD1Q96FB5 475 aaKnown RBP10.72□□□□□ -0.69
VTI1A-205ENST00000483122 MENTQ9BUN1 341 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 EDEM2Q9BV94 578 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 IL21Q9HBE4 155 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 MYOZ1Q9NP98 299 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-205ENST00000483122 RPS10P5Q9NQ39 176 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 CDV3Q9UKY7 258 aaKnown RBP10.72□□□□□ -0.69
VTI1A-205ENST00000483122 KLHDC2Q9Y2U9 406 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 hCG_1809904A0A1W2PP81 198 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 A0A1W2PR64 198 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 A0A1W2PRV1 198 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 DUXAA6NLW8 204 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 C4orf47A7E2U8 309 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 AGPAT2O15120 278 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 UPK3AO75631 287 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ZBTB25P24278 435 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 CAV2P51636 162 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 METAP1P53582 386 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF124Q15973 351 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 C2orf76Q3KRA6 126 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ABHD17CQ6PCB6 329 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 TMPPEQ6ZT21 453 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ETFBKMTQ8IXQ9 262 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 DMRTC2Q8IXT2 367 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-205ENST00000483122 BPIFB2Q8N4F0 458 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 FOXRED1Q96CU9 486 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-205ENST00000483122 DTD2Q96FN9 168 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 SLC6A7Q99884 636 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ULBP3Q9BZM4 244 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 ATG5Q9H1Y0 275 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 FLRT3Q9NZU0 649 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 SLC23A2Q9UGH3 650 aa10.72□□□□□ -0.69
VTI1A-205ENST00000483122 TEX13DA0A0J9YY54 714 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-205ENST00000483122 A0A1W2PPH5 198 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 PHYHO14832 338 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 SRPX2O60687 465 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ABLIM3O94929 683 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 MT-ND4LP03901 98 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 THBS1P07996 1170 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ITGA5P08648 1049 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ACKR3P25106 362 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 CD1CP29017 333 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 GPR1P46091 355 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 HTR5AP47898 357 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 P2RY4P51582 365 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ACTBP60709 375 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ACTG1P63261 375 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 NKPD1Q17RQ9 610 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ALG11Q2TAA5 492 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 CDNFQ49AH0 187 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 KRBOX4Q5JUW0 171 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 TMEM215Q68D42 235 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 CNKSR3Q6P9H4 555 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 KCTD9Q7L273 389 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 LYG2Q86SG7 212 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 TMEM25Q86YD3 366 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF511Q8NB15 262 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 NPEPL1Q8NDH3 523 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 PTCHD1Q96NR3 888 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 MICU1Q9BPX6 476 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 CST11Q9H112 138 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 TM7SF3Q9NS93 570 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 LPAR3Q9UBY5 353 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 MRM2Q9UI43 246 aaKnown RBP10.71□□□□□ -0.69
VTI1A-205ENST00000483122 YBX2Q9Y2T7 364 aaKnown RBP10.71□□□□□ -0.69
VTI1A-205ENST00000483122 ZNF780BQ9Y6R6 833 aa10.71□□□□□ -0.69
VTI1A-205ENST00000483122 SCN2AQ99250 2005 aa10.71□□□□□ -0.7
VTI1A-205ENST00000483122 TBC1D3KA0A087X1G2 549 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 TMEM72A0PK05 275 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms