RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HGFACQ04756 655 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 C10orf128Q5T292 105 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 C11orf71Q6IPW1 123 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
HMGA1-206ENST00000478214 FBXL14Q8N1E6 418 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 MUC15Q8N387 334 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 ARIH2OSQ8N7S6 290 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 MS4A3Q96HJ5 214 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 Q96M85 177 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 ZNF75AQ96N20 296 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 ALG12Q9BV10 488 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 HEATR1Q9H583 2144 aaKnown RBP13.53□□□□□ -0.24
HMGA1-206ENST00000478214 KRCC1Q9NPI7 259 aaPredicted RBP13.53□□□□□ -0.24
HMGA1-206ENST00000478214 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
HMGA1-206ENST00000478214 A6NIZ1 184 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 GYG2O15488 501 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 OR10H3O60404 316 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 UBL3O95164 117 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 NDUFB2O95178 105 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF14P17017 642 aaPredicted RBP13.52□□□□□ -0.25
HMGA1-206ENST00000478214 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.25
HMGA1-206ENST00000478214 CDAP32320 146 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 MAGEA2P43356 314 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 PTDSS1P48651 473 aaKnown RBP13.52□□□□□ -0.25
HMGA1-206ENST00000478214 FXYD6P3P58550 94 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 RAP1BP61224 184 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 RAP1AP62834 184 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 SLC25A47Q6Q0C1 308 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 PRSS57Q6UWY2 283 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 NSMAFQ92636 917 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 SLC7A6OSQ96CW6 309 aaPredicted RBP13.52□□□□□ -0.25
HMGA1-206ENST00000478214 ASB9Q96DX5 294 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 RBP7Q96R05 134 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 SMURF2Q9HAU4 748 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 CBLN4Q9NTU7 201 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 TMCC3Q9ULS5 477 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 MED13LQ71F56 2210 aa13.52□□□□□ -0.25
HMGA1-206ENST00000478214 H7C1C5 153 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 ACOT8O14734 319 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 NDUFS7O75251 213 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 ENTPD5O75356 428 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 FARS2O95363 451 aaKnown RBP13.51□□□□□ -0.25
HMGA1-206ENST00000478214 RAB36O95755 333 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 NR2C1P13056 603 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 LCN6P62502 163 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 RAB39AQ14964 217 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 DNAL1Q4LDG9 190 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 THEM4Q5T1C6 240 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 VHLLQ6RSH7 139 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 SLC16A14Q7RTX9 510 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 FAM122BQ7Z309 247 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 IL17RDQ8NFM7 739 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 OR4F15Q8NGB8 312 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 TRMT61AQ96FX7 289 aaKnown RBP13.51□□□□□ -0.25
HMGA1-206ENST00000478214 Q96MF0 132 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 CACNG6Q9BXT2 260 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 DENND2DQ9H6A0 471 aaPredicted RBP13.51□□□□□ -0.25
HMGA1-206ENST00000478214 MAGIXQ9H6Y5 334 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 CA10Q9NS85 328 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 GRHPRQ9UBQ7 328 aa13.51□□□□□ -0.25
HMGA1-206ENST00000478214 TNFRSF11BO00300 401 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 KRT36O76013 467 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 HMGA2P52926 109 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 MRPS34P82930 218 aaKnown RBP13.5□□□□□ -0.25
HMGA1-206ENST00000478214 CHRNB3Q05901 458 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 TRAP1Q12931 704 aaKnown RBP13.5□□□□□ -0.25
HMGA1-206ENST00000478214 PPP1R8Q12972 351 aaKnown RBP13.5□□□□□ -0.25
HMGA1-206ENST00000478214 SGCAQ16586 387 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 MESTQ5EB52 335 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 PGM2L1Q6PCE3 622 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF584Q8IVC4 421 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 LRRC18Q8N456 261 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 NABP1Q96AH0 204 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 RASD2Q96D21 266 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 FBXO17Q96EF6 278 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 LRGUKQ96M69 825 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 ZNF570Q96NI8 536 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 GPX7Q96SL4 187 aaPredicted RBP13.5□□□□□ -0.25
HMGA1-206ENST00000478214 BTBD10Q9BSF8 475 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 RNF121Q9H920 327 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 SIAEQ9HAT2 523 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 NRIP3Q9NQ35 241 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 DLL4Q9NR61 685 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 GDF2Q9UK05 429 aaPredicted RBP13.5□□□□□ -0.25
HMGA1-206ENST00000478214 LYVE1Q9Y5Y7 322 aa13.5□□□□□ -0.25
HMGA1-206ENST00000478214 TEX13CA0A0J9YWL9 993 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 SLC22A23A1A5C7 686 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 XKRYO14609 159 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 STAMBPO95630 424 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 IGHV4-39P01824 125 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 SERPINA5P05154 406 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 FPR3P25089 353 aa13.49□□□□□ -0.25
HMGA1-206ENST00000478214 IFNGR2P38484 337 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms