RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	OR14K1	Q8NGZ2	314 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	POC1B	Q8TC44	478 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRGPRD	Q8TDS7	321 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SH3RF2	Q8TEC5	729 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR8D1	Q8WZ84	308 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	HAVCR1	Q96D42	359 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GALNT14	Q96FL9	552 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF764	Q96H86	408 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZFP3	Q96NJ6	502 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	KLHL5	Q96PQ7	755 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	DMRTA2	Q96SC8	542 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SULT4A1	Q9BR01	284 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PIGQ	Q9BRB3	760 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDC1	Q9BTX1	674 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PBDC1	Q9BVG4	233 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ADGRE3	Q9BY15	652 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC17A9	Q9BYT1	436 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	POTEKP	Q9BYX7	375 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ATG5	Q9H1Y0	275 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC32A1	Q9H598	525 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM185B	Q9H7F4	350 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	FKRP	Q9H9S5	495 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D17	Q9HA65	648 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	BRF2	Q9HAW0	419 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPACA1	Q9HBV2	294 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MSL2	Q9HCI7	577 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPS10P5	Q9NQ39	176 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PARP11	Q9NR21	331 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GLRX2	Q9NS18	164 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CA10	Q9NS85	328 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ASF1B	Q9NVP2	202 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	NKIRAS2	Q9NYR9	191 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TVP23B	Q9NYZ1	205 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	DHCR7	Q9UBM7	475 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRPC4	Q9UBN4	977 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	DNAJB11	Q9UBS4	358 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LPAR3	Q9UBY5	353 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CACFD1	Q9UGQ2	172 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MSRA	Q9UJ68	235 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SH3BGRL2	Q9UJC5	107 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PITPNC1	Q9UKF7	332 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDC42EP3	Q9UKI2	254 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANKRD36	A6QL64	1941 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ANK1	P16157	1881 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	PDCD11	Q14690	1871 aa	Known RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	RALGAPA2	Q2PPJ7	1873 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TRBV6-7	A0A0A0MS04	114 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520		A0A1B0GTI1	187 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SMIM28	A0A1B0GU29	152 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TRBC2	A0A5B9	178 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	C7orf77	A4D0Y5	90 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF724	A8MTY0	619 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520		B4DEV8	164 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520		E7EQ34	232 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	RTCA	O00442	366 aa	Known RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	GOSR2	O14653	212 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	TP53I11	O14683	189 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OGG1	O15527	345 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	OR10H3	O60404	316 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	NME6	O75414	186 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	MOSPD3	O75425	235 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	GJB5	O95377	273 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	NUDT3	O95989	172 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACTL6A	O96019	429 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	IGF2	P01344	180 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	GUSB	P08236	651 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ADRA2A	P08913	450 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	UCHL1	P09936	223 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SFTA3	P0C7M3	94 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	AKAIN1	P0CW23	69 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ETFA	P13804	333 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	FOLR1	P15328	257 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ZNF25	P17030	456 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	BCKDHB	P21953	392 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	APOBEC3A	P31941	199 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CCKAR	P32238	428 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CCR1	P32246	355 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	BMI1	P35226	326 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	THBS4	P35443	961 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	PPM1A	P35813	382 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ARR3	P36575	388 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	AGTR2	P50052	363 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	GNG10	P50151	68 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	HTR6	P50406	440 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	CEBPG	P53567	150 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	RABGGTB	P53611	331 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	H2BFS	P57053	126 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	SOX8	P57073	446 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	YBEY	P58557	167 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ERVFC1-1	P60608	527 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACTB	P60709	375 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ST8SIA6	P61647	398 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	RAN	P62826	216 aa	Known RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	ACTG1	P63261	375 aa		4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	NKX6-1	P78426	367 aa	Predicted RBP	4.27	□□□□□ -1.73
PTCD3-212	ENST00000477520	DEFB103A	P81534	67 aa		4.27	□□□□□ -1.73

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