RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.061e-28■■■□□ 15
DDX39B-217ENST00000474961 TMIGD3P0DMS9 266 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 CLUP10909 449 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 EDNRAP25101 427 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 FMO3P31513 532 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 PYCR1P32322 319 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 KIR2DL2P43627 348 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 CASP6P55212 293 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 PER3P56645 1201 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 SIRPAP78324 504 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 TEKQ02763 1124 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 FMODQ06828 376 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 LGALS3BPQ08380 585 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 PMPCAQ10713 525 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 FOXF2Q12947 444 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 MRPL49Q13405 166 aaKnown RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 SMN1Q16637 294 aaKnown RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 HIST3H3Q16695 136 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 PHYHD1Q5SRE7 291 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 C6orf141Q5SZD1 244 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 AADACL4Q5VUY2 407 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 MEDAGQ5VYS4 303 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 LAIR2Q6ISS4 152 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 LRFN4Q6PJG9 635 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 SLC25A47Q6Q0C1 308 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 FAM214BQ7L5A3 538 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 DMRTC2Q8IXT2 367 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 ZNF100Q8IYN0 542 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 NOXO1Q8NFA2 376 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 OR6N1Q8NGY5 312 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 NMD3Q96D46 503 aaKnown RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 Q96MT0 163 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 ZNF582Q96NG8 517 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 ZFP3Q96NJ6 502 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 TSSK2Q96PF2 358 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 RBP7Q96R05 134 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 NUAK2Q9H093 628 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 SYT4Q9H2B2 425 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 OR51V1Q9H2C8 321 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 RERGLQ9H628 205 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 C12orf49Q9H741 205 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 SRA1Q9HD15 236 aaKnown RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 RPRD1BQ9NQG5 326 aaKnown RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 ASB6Q9NWX5 421 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 GLTPQ9NZD2 209 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 H2AFY2Q9P0M6 372 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 B9D1Q9UPM9 204 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 OSGIN2Q9Y236 505 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 LRCH1Q9Y2L9 728 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 EMC9Q9Y3B6 208 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 FKBP7Q9Y680 259 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 PCNX1Q96RV3 2341 aa8.41□□□□□ -1.06
DDX39B-217ENST00000474961 NCOA6Q14686 2063 aaPredicted RBP8.41□□□□□ -1.06
DDX39B-217ENST00000474961 IGKV1D-43A0A0B4J1Z2 117 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 SH3D21A4FU49 640 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 CCDC182A6NF36 153 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 FAM171A2A8MVW0 826 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 B8ZZF3 427 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 E9PLN8 166 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 M0R3G1 203 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 PRODHO43272 600 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 SLC16A7O60669 478 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 KHDRBS3O75525 346 aaKnown RBP8.4□□□□□ -1.06
DDX39B-217ENST00000474961 UPK3AO75631 287 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 GYPBP06028 91 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 CRHP06850 196 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 STSP08842 583 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 QDPRP09417 244 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 CTLA4P16410 223 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 SPI1P17947 270 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 SLC2A5P22732 501 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 CRABP1P29762 137 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 CA7P43166 264 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 OR3A2P47893 321 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 ZNF133P52736 654 aaPredicted RBP8.4□□□□□ -1.06
DDX39B-217ENST00000474961 NUDT6P53370 316 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 TLE1Q04724 770 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 APOFQ13790 326 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 ETFDHQ16134 617 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 EIF2S3LQ2VIR3 472 aaKnown RBP8.4□□□□□ -1.06
DDX39B-217ENST00000474961 KLHL12Q53G59 568 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 SOWAHCQ53LP3 525 aaPredicted RBP8.4□□□□□ -1.06
DDX39B-217ENST00000474961 THEM4Q5T1C6 240 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 RIPPLY2Q5TAB7 128 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 TSPO2Q5TGU0 170 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 NXNL2Q5VZ03 156 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 TMEM211Q6ICI0 200 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 VWA1Q6PCB0 445 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 NCCRP1Q6ZVX7 275 aaPredicted RBP8.4□□□□□ -1.06
DDX39B-217ENST00000474961 ZBTB46Q86UZ6 589 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 GID4Q8IVV7 300 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 OR6V1Q8N148 313 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 GPR137CQ8N3F9 429 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 CNEP1R1Q8N9A8 125 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 NAXEQ8NCW5 288 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 OR51L1Q8NGJ5 315 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 OR6K3Q8NGY3 331 aa8.4□□□□□ -1.06
DDX39B-217ENST00000474961 OR2T4Q8NH00 348 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms