RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TCEA1P23193 301 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 LIPAP38571 399 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 STARP49675 285 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 RGS6P49758 472 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 WNT4P56705 351 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 PLGLB1Q02325 96 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 POU3F1Q03052 451 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 GPR50Q13585 617 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 MELKQ14680 651 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF169Q14929 603 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TOMM20Q15388 145 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 STK11Q15831 433 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SSX1Q16384 188 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CTF1Q16619 201 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TBR1Q16650 682 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TIGD6Q17RP2 521 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CDONQ4KMG0 1287 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 KLHL12Q53G59 568 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 THEM4Q5T1C6 240 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 C10orf128Q5T292 105 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 PDSS1Q5T2R2 415 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 HBMQ6B0K9 141 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TMEM225Q6GV28 225 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SLC25A47Q6Q0C1 308 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CD200R1LQ6Q8B3 271 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF322Q6U7Q0 402 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 B3GLCTQ6Y288 498 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SLC16A9Q7RTY1 509 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CDC20BQ86Y33 519 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 PM20D2Q8IYS1 436 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ZADH2Q8N4Q0 377 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 RBMXL3Q8N7X1 1067 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 NOXO1Q8NFA2 376 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SLC26A10Q8NG04 563 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 OR9K2Q8NGE7 335 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 OR51G2Q8NGK0 314 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 OR10D3Q8NH80 312 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 RNF128Q8TEB7 428 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 RAB2BQ8WUD1 216 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ABTB1Q969K4 478 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TMEM45BQ96B21 275 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ISOC1Q96CN7 298 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ZMYND19Q96E35 227 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 DNAJA3Q96EY1 480 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 WDYHV1Q96HA8 205 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 OPALINQ96PE5 141 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TSSK2Q96PF2 358 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CNN2Q99439 309 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 FUNDC2Q9BWH2 189 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 YIPF3Q9GZM5 350 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 PRDM14Q9GZV8 571 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SYT4Q9H2B2 425 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SLC6A15Q9H2J7 730 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 BCO1Q9HAY6 547 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 TIGARQ9NQ88 270 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CHCHD3Q9NX63 227 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 MED29Q9NX70 200 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 KLHL9Q9P2J3 617 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 RSL24D1Q9UHA3 163 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ENPP5Q9UJA9 477 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 FOXD3Q9UJU5 478 aaPredicted RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 NPIPA1Q9UND3 350 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 SF3B6Q9Y3B4 125 aaKnown RBP5.88□□□□□ -1.47
ATG4A-207ENST00000474825 FLVCR1Q9Y5Y0 555 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CACNA1GO43497 2377 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ATMQ13315 3056 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 TRGV5A0A0B4J1U4 118 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 IGKV1D-43A0A0B4J1Z2 117 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 A0A1W2PQL4 384 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 HSPB2A8KAH6 182 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 FAM166BA8MTA8 275 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF724A8MTY0 619 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 H3BMQ9 156 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 MKRN2OSH3BPM6 223 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 CCRL2O00421 344 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 EIF1AYO14602 144 aaKnown RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 MYL12BO14950 172 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 OGG1O15527 345 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 KHDRBS3O75525 346 aaKnown RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 SULT1C4O75897 302 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 AQP8O94778 261 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 APOL3O95236 402 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 LALBAP00709 142 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 PLGP00747 810 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 IGHG1P01857 330 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 NR2C1P13056 603 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 GALP22466 123 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 PSMB9P28065 219 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 PYCR1P32322 319 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 NTF4P34130 210 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 RFC3P40938 356 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 MAP2K3P46734 347 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 GTF2A1P52655 376 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 BIDP55957 195 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 TMPRSS3P57727 454 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 RPS3AP61247 264 aaKnown RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ROM1Q03395 351 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 DBPQ10586 325 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms