RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 ARFIP2P53365 341 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 MPP2Q14168 576 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 MELKQ14680 651 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 ARMCX4Q5H9R4 360 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 FAM209AQ5JX71 171 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 C22orf15Q8WYQ4 148 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
EPCAM-205ENST00000474691 TSPAN32Q96QS1 320 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 GPA33Q99795 319 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 TMPRSS13Q9BYE2 586 aa11.78□□□□□ -0.52
EPCAM-205ENST00000474691 IGLV3-9A0A075B6K5 115 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 A0A1W2PRG6 482 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 TMEM120BA0PK00 339 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 CPSF4LA6NMK7 179 aaKnown RBP11.77□□□□□ -0.53
EPCAM-205ENST00000474691 KPNA4O00629 521 aaPredicted RBP11.77□□□□□ -0.53
EPCAM-205ENST00000474691 SPRY3O43610 288 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 CHP2O43745 196 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 MGRN1O60291 552 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 SNNO75324 88 aaPredicted RBP11.77□□□□□ -0.53
EPCAM-205ENST00000474691 SNAP29O95721 258 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 AVPP01185 164 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 IGHV2-5P01817 119 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 ZNF250P15622 560 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 GUCA1AP43080 201 aaPredicted RBP11.77□□□□□ -0.53
EPCAM-205ENST00000474691 ERVS71-1P61550 626 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 LCN2P80188 198 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 NANOGNBQ7Z5D8 188 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 ZNF584Q8IVC4 421 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 SMYD1Q8NB12 490 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 FGFBP3Q8TAT2 258 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 OR52B2Q96RD2 323 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 SLC19A3Q9BZV2 496 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 CYSLTR2Q9NS75 346 aa11.77□□□□□ -0.53
EPCAM-205ENST00000474691 BLOC1S5-TXNDC5H3BN57 136 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 FMO6PO60774 539 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 FOXH1O75593 365 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 NR2C1P13056 603 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 LIPAP38571 399 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 UBA52P62987 128 aaKnown RBP11.76□□□□□ -0.53
EPCAM-205ENST00000474691 ZMAT1Q5H9K5 638 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
EPCAM-205ENST00000474691 SPDL1Q96EA4 605 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 TMEM38AQ9H6F2 299 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 CCDC167Q9P0B6 97 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 STX18Q9P2W9 335 aaKnown RBP11.76□□□□□ -0.53
EPCAM-205ENST00000474691 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.76□□□□□ -0.53
EPCAM-205ENST00000474691 ZNF229Q9UJW7 825 aa11.76□□□□□ -0.53
EPCAM-205ENST00000474691 V9GYY5 206 aaPredicted RBP11.76□□□□□ -0.53
EPCAM-205ENST00000474691 M0R3H8 397 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 CD247P20963 164 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 STOMP27105 288 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 GDI2P50395 445 aaKnown RBP11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ATP4BP51164 291 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 DAP3P51398 398 aaKnown RBP11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ZNF74Q16587 644 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 CYP51A1Q16850 503 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 NRN1LQ496H8 165 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ENTPD8Q5MY95 495 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 LRIF1Q5T3J3 769 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 LRFN4Q6PJG9 635 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ARL9Q6T311 187 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 WDR88Q6ZMY6 472 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 WDFY1Q8IWB7 410 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 KLHL36Q8N4N3 616 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 PAQR4Q8N4S7 273 aaPredicted RBP11.75□□□□□ -0.53
EPCAM-205ENST00000474691 VANGL1Q8TAA9 524 aaPredicted RBP11.75□□□□□ -0.53
EPCAM-205ENST00000474691 MCHR2Q969V1 340 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 MRI1Q9BV20 369 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ZNF696Q9H7X3 374 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 ZMAT3Q9HA38 289 aaKnown RBP11.75□□□□□ -0.53
EPCAM-205ENST00000474691 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 TCF7L2Q9NQB0 619 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
EPCAM-205ENST00000474691 C5orf49A4QMS7 147 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 KCNAB3O43448 404 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 DEAF1O75398 565 aaPredicted RBP11.74□□□□□ -0.53
EPCAM-205ENST00000474691 IGHV3-13P01766 116 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 SBK2P0C263 348 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 PGA4P0DJD7 388 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 PGA3P0DJD8 388 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 HKR1P10072 659 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 MAKP20794 623 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 TNFSF4P23510 183 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 ARHGDIAP52565 204 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 WDR4P57081 412 aaKnown RBP11.74□□□□□ -0.53
EPCAM-205ENST00000474691 BAMBIQ13145 260 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 SGCAQ16586 387 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 PABPC1L2AQ5JQF8 200 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 SPATA46Q5T0L3 261 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 THEM4Q5T1C6 240 aa11.74□□□□□ -0.53
EPCAM-205ENST00000474691 COMTD1Q86VU5 262 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms