RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 GDNFP39905 211 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 FOXF1Q12946 379 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 UBE2NLQ5JXB2 153 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TMPRSS12Q86WS5 348 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 LINC00346Q8IVM7 164 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 SYNPRQ8TBG9 265 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 SNX18Q96RF0 628 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TXNIPQ9H3M7 391 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 CAMK2AQ9UQM7 478 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 OR6C76A6NM76 312 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TCRBP04435 133 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 ZNF28P17035 718 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 PTH2RP49190 550 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 EFNB2P52799 333 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 ADAM8P78325 824 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 SNTA1Q13424 505 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 CORO6Q6QEF8 472 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 OR10G3Q8NGC4 313 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 HGDQ93099 445 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 CREB3L1Q96BA8 519 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 C4orf45Q96LM5 186 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 SPSB2Q99619 263 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TCF7L1Q9HCS4 588 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 ASPMQ8IZT6 3477 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 OR2J2O76002 312 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 AHSA1O95433 338 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 IFNGR1P15260 489 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 KLK2P20151 261 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 KLF9Q13886 244 aaPredicted RBP13.5□□□□□ -0.25
UBXN11-213ENST00000472155 CDK10Q15131 360 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 ZNF385CQ66K41 422 aaPredicted RBP13.5□□□□□ -0.25
UBXN11-213ENST00000472155 OIT3Q8WWZ8 545 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 RCE1Q9Y256 329 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 A0A1B0GTQ1 180 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 OR6A2O95222 327 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 CXCL3P19876 107 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 CDK2P24941 298 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 EMP2P54851 167 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 PHF19Q5T6S3 580 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 OR11H7Q8NGC8 314 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 CACNG6Q9BXT2 260 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 SRPK3Q9UPE1 567 aa13.5□□□□□ -0.25
UBXN11-213ENST00000472155 ITGA10O75578 1167 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 MT-ATP6P00846 226 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 CFIP05156 583 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 FOSL2P15408 326 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 CCKBRP32239 447 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 DCDP81605 110 aaKnown RBP13.49□□□□□ -0.25
UBXN11-213ENST00000472155 NR0B2Q15466 257 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 RABEPKQ7Z6M1 372 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 DND1Q8IYX4 353 aaKnown RBP13.49□□□□□ -0.25
UBXN11-213ENST00000472155 SMIM4Q8WVI0 70 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 MRPL48Q96GC5 212 aaKnown RBP13.49□□□□□ -0.25
UBXN11-213ENST00000472155 OR8B4Q96RC9 309 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 FOXJ3Q9UPW0 622 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 BDP1A6H8Y1 2624 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 LMX1BO60663 402 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 LCN1P31025 176 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 SLC17A1Q14916 467 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 NUP54Q7Z3B4 507 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 KCTD20Q7Z5Y7 419 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 CRB3Q9BUF7 120 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 ABHD6Q9BV23 337 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 GHITMQ9H3K2 345 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 GAREM1Q9H706 876 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 VSX1Q9NZR4 365 aaPredicted RBP13.49□□□□□ -0.25
UBXN11-213ENST00000472155 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 RARRES3Q9UL19 164 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 FKBP7Q9Y680 259 aa13.49□□□□□ -0.25
UBXN11-213ENST00000472155 TRBV5-7A0A0A0MS05 114 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 RGS13O14921 159 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 ZNF254O75437 659 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 PTGDSP41222 190 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 SLC26A5P58743 744 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
UBXN11-213ENST00000472155 ACY1Q03154 408 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
UBXN11-213ENST00000472155 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 OR51D1Q8NGF3 324 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 AKAP1Q92667 903 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBXN11-213ENST00000472155 NXPE2Q96DL1 559 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 GAL3ST1Q99999 423 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 SLX1AQ9BQ83 275 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 KLRF1Q9NZS2 232 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 PILRBQ9UKJ0 227 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 CSRP1P21291 193 aaKnown RBP13.48□□□□□ -0.25
UBXN11-213ENST00000472155 EGR3Q06889 387 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 PUDPQ08623 228 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 FAPQ12884 760 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
UBXN11-213ENST00000472155 C6orf183Q5T699 404 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 PMS2CLQ68D20 193 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 LAMTOR1Q6IAA8 161 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 TCTE3Q8IZS6 198 aa13.48□□□□□ -0.25
UBXN11-213ENST00000472155 PLPP7Q8NBV4 271 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms