RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SLC23A1Q9UHI7 598 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 GTF2A1LQ9UNN4 478 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 RALGAPA1Q6GYQ0 2036 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 IGLV1-36A0A0B4J1U3 117 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 A8MVM7 634 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 DOK2O60496 412 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 TSC22D2O75157 780 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 KHDRBS3O75525 346 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 KRT33AO76009 404 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 DXOO77932 396 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 MT-ATP6P00846 226 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 FBXO45P0C2W1 286 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 LCN1P31025 176 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 VEGFCP49767 419 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 AFF3P51826 1226 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 ZP1P60852 638 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 SMAD2Q15796 467 aaKnown RBP13.22□□□□□ -0.29
CBWD3-205ENST00000469687 CD276Q5ZPR3 534 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 GRINAQ7Z429 371 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 GPR148Q8TDV2 347 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 PMEPA1Q969W9 287 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 OR10A4Q9H209 315 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 TMEM14AQ9Y6G1 99 aa13.22□□□□□ -0.29
CBWD3-205ENST00000469687 PLPP3O14495 311 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 GPR171O14626 319 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 ANXA3P12429 323 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 POU3F3P20264 500 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-205ENST00000469687 CCKBRP32239 447 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 EFNB2P52799 333 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 ART1P52961 327 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 TAS2R20P59543 309 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 SLC17A1Q14916 467 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 SHBQ15464 509 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 OR7E24Q6IFN5 339 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 ZNF574Q6ZN55 896 aaPredicted RBP13.21□□□□□ -0.29
CBWD3-205ENST00000469687 PRSS42Q7Z5A4 293 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 BIVMQ86UB2 503 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 CARFQ8N187 725 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 OR56B4Q8NH76 319 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 TSEN15Q8WW01 171 aaKnown RBP13.21□□□□□ -0.29
CBWD3-205ENST00000469687 FCAMRQ8WWV6 532 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 MCHR2Q969V1 340 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 ARL5BQ96KC2 179 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 TXNIPQ9H3M7 391 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 EMC7Q9NPA0 242 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 MGAT4AQ9UM21 535 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 MRPS17Q9Y2R5 130 aaKnown RBP13.21□□□□□ -0.29
CBWD3-205ENST00000469687 MED12Q93074 2177 aa13.21□□□□□ -0.29
CBWD3-205ENST00000469687 SLC22A23A1A5C7 686 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 RAB40ALP0C0E4 278 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 ADAM8P78325 824 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 RASGEF1BQ0VAM2 473 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 MAMSTRQ6ZN01 415 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 Q6ZTK2 550 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 APCDD1LQ8NCL9 501 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 PLPP5Q8NEB5 264 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 MNTQ99583 582 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 ZNF768Q9H5H4 540 aaKnown RBP13.21□□□□□ -0.3
CBWD3-205ENST00000469687 STMN3Q9NZ72 180 aa13.21□□□□□ -0.3
CBWD3-205ENST00000469687 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ANKRD20A5PA0PJZ0 165 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 OR6C76A6NM76 312 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SHISA8B8ZZ34 492 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SSNA1O43805 119 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 PEX14O75381 377 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 OR6A2O95222 327 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ITGA5P08648 1049 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SULT1A3P0DMM9 295 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SULT1A4P0DMN0 295 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 FMODQ06828 376 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 OR51D1Q8NGF3 324 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ZNF431Q8TF32 576 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 C8orf44Q96CB5 159 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SLC7A5P2Q9GIP4 190 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 VSX1Q9NZR4 365 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 VDAC3Q9Y277 283 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 PHF3Q92576 2039 aaKnown RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 FTCDNL1E5RQL4 147 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ARPC1BO15143 372 aaKnown RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ALX3O95076 343 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 AHSA1O95433 338 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SELENOPP49908 381 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 RAG2P55895 527 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 STARD6P59095 220 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 LINC00303Q3SY05 128 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 WDR74Q6RFH5 385 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ARSKQ6UWY0 536 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ZNF679Q8IYX0 411 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 ABHD6Q9BV23 337 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 MED11Q9P086 117 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 SUSD2Q9UGT4 822 aa13.2□□□□□ -0.3
CBWD3-205ENST00000469687 STEAP1Q9UHE8 339 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms