RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 GRIA1P42261 906 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 HAAOP46952 286 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 NCBP2P52298 156 aaKnown RBP eCLIP2.89□□□□□ -1.95
XRN1-207ENST00000468894 EIF3EP60228 445 aaKnown RBP2.89□□□□□ -1.95
XRN1-207ENST00000468894 LIPEQ05469 1076 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 SPAG1Q07617 926 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 IL24Q13007 206 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 TTLL9Q3SXZ7 439 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 SMUG1Q53HV7 270 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 IGFL1Q6UW32 110 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 C19orf35Q6ZS72 473 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 NUDCD3Q8IVD9 361 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 LYPD1Q8N2G4 141 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 ZNF615Q8N8J6 731 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 C15orf56Q8N910 161 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 ZNF709Q8N972 641 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 OR8K3Q8NH51 312 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 PYROXD1Q8WU10 500 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 LLPHQ9BRT6 129 aaKnown RBP2.89□□□□□ -1.95
XRN1-207ENST00000468894 SIKE1Q9BRV8 207 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 XKR8Q9H6D3 395 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 PARVGQ9HBI0 331 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 OR12D3Q9UGF7 316 aa2.89□□□□□ -1.95
XRN1-207ENST00000468894 AK9Q5TCS8 1911 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 IGKV1D-13A0A0B4J2D9 117 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 LOC100653049A0A140TA62 436 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 SERTM2A0A1B0GWG4 89 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 SERPINE3A8MV23 424 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 XKRYO14609 159 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 CASC3O15234 703 aaKnown RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 CACNG3O60359 315 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 TOM1O60784 492 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 UPK3AO75631 287 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 KRT34O76011 436 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 IGKV1-13P0DP09 117 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 NCK1P16333 377 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 GYG1P46976 350 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 ATP1B3P54709 279 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 PRRX1P54821 245 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 MYL6P60660 151 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 GPM6BQ13491 265 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 RCN1Q15293 331 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 UBE2SQ16763 222 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 ZBED5Q49AG3 693 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 TTC19Q6DKK2 380 aaPredicted RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 CNIH2Q6PI25 160 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 Q6ZPB1 254 aaPredicted RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 LINC00173Q6ZV60 143 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 PSTKQ8IV42 348 aaKnown RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 FAM110BQ8TC76 370 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 PEX13Q92968 403 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 C19orf60Q96EN9 201 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 ARL5BQ96KC2 179 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 ZNF641Q96N77 438 aaPredicted RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 WFIKKN1Q96NZ8 548 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 FAIM2Q9BWQ8 316 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 OSBPL10Q9BXB5 764 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 C8orf33Q9H7E9 229 aaPredicted RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 SYNDIG1Q9H7V2 258 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 MRPL47Q9HD33 250 aaKnown RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 ADAP2Q9NPF8 381 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 EXD2Q9NVH0 621 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 ZNF629Q9UEG4 869 aaPredicted RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 PACSIN2Q9UNF0 486 aaPredicted RBP2.88□□□□□ -1.95
XRN1-207ENST00000468894 SNX6Q9UNH7 406 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 IGSF9BQ9UPX0 1349 aa2.88□□□□□ -1.95
XRN1-207ENST00000468894 COL1A2P08123 1366 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 IGHV3-66A0A0C4DH42 116 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 COLCA2A8K830 154 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 NDUFS8O00217 210 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 DNALI1O14645 258 aaPredicted RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 NVLO15381 856 aaKnown RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 ZW10O43264 779 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 CISD3P0C7P0 127 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 GLRA2P23416 452 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 GPR6P46095 362 aaPredicted RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 CCT3P49368 545 aaKnown RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 SUB1P53999 127 aaKnown RBP eCLIP2.87□□□□□ -1.95
XRN1-207ENST00000468894 SLC7A9P82251 487 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 DGUOKQ16854 277 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 FAM173BQ6P4H8 233 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 METAP1DQ6UB28 335 aaPredicted RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 ENPP6Q6UWR7 440 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 DHDDSQ86SQ9 333 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 NKAIN4Q8IVV8 208 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 ZNF679Q8IYX0 411 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 ZCCHC7Q8N3Z6 543 aaKnown RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 RNF182Q8N6D2 247 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 SGK3Q96BR1 496 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 ZNF578Q96N58 590 aaPredicted RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 MS4A4EQ96PG1 132 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 PLIN2Q99541 437 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 CCDC77Q9BR77 488 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 GABARAPL3Q9BY60 117 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 NSRP1Q9H0G5 558 aaKnown RBP2.87□□□□□ -1.95
XRN1-207ENST00000468894 VCX3BQ9H321 246 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 HAUS4Q9H6D7 363 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 POLE4Q9NR33 117 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 SIRT7Q9NRC8 400 aa2.87□□□□□ -1.95
XRN1-207ENST00000468894 ZNF222Q9UK12 451 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms