RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NGFRP08138 427 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 SPARCP09486 303 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 MATN1P21941 496 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 IGHV1-2P23083 117 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 AHCYP23526 432 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 PRTN3P24158 256 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 DUSP1P28562 367 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 PCP4P48539 62 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 MAPK12P53778 367 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 NME5P56597 212 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 RAB10P61026 200 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 CFHR3Q02985 330 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 POU3F1Q03052 451 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 SPOCK1Q08629 439 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 CSTF3Q12996 717 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 STX5Q13190 355 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 DECR1Q16698 335 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 PLPPR5Q32ZL2 321 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 TRMT12Q53H54 448 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 ANKRD22Q5VYY1 191 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 CST9LP1Q5W188 147 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 FBXW9Q5XUX1 488 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 METTL2BQ6P1Q9 378 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 NPSR1Q6W5P4 371 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 RBMS3Q6XE24 437 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 MISPQ8IVT2 679 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 KDM8Q8N371 416 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 BPIFB2Q8N4F0 458 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 RBM15BQ8NDT2 890 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 OR6S1Q8NH40 331 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 CDC26Q8NHZ8 85 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 NANPQ8TBE9 248 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 ST7LQ8TDW4 575 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 KLHL29Q96CT2 875 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 FBXO17Q96EF6 278 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 THOC1Q96FV9 657 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 RNF145Q96MT1 663 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF681Q96N22 645 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 MUS81Q96NY9 551 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 NR1H4Q96RI1 486 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 ZBTB18Q99592 522 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 PSD2Q9BQI7 771 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 FAIM2Q9BWQ8 316 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 TBL1XR1Q9BZK7 514 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 PLK3Q9H4B4 646 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 MOV10Q9HCE1 1003 aaKnown RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 ESM1Q9NQ30 184 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 ACSS1Q9NUB1 689 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 TAS2R16Q9NYV7 291 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 CD274Q9NZQ7 290 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 SNX6Q9UNH7 406 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 VDAC3Q9Y277 283 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 AMDHD2Q9Y303 409 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 MMP24Q9Y5R2 645 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 TEX264Q9Y6I9 313 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 HEATR1Q9H583 2144 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 A0A0G2JMP0 313 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 A0A0X1KG70 313 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 A0A1W2PRB8 838 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 CIB4A0PJX0 185 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 C5orf51A6NDU8 294 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 C17orf51A8MQB3 221 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 CLDN34H7C241 214 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 M0QZ24 198 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 M0R1B8 84 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 SLC33A1O00400 549 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 TSPAN4O14817 238 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 TIMM23O14925 209 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 SCAMP2O15127 329 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 SEC31AO94979 1220 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ANGPTL1O95841 491 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 KRT8P05787 483 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 IFI6P09912 130 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 UROSP10746 265 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 LYL1P12980 280 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ADRA2CP18825 462 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 LCN1P31025 176 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 FEN1P39748 380 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 CAPZA1P52907 286 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 PGGT1BP53609 377 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 TAS2R39P59534 338 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 PDK3Q15120 406 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 MAPRE2Q15555 327 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ZNHIT3Q15649 155 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 CCNYL2Q5T2Q4 361 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 SAXO2Q658L1 398 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 DEGS2Q6QHC5 323 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 RAD9BQ6WBX8 426 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 BCDIN3DQ7Z5W3 292 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 MARCH3Q86UD3 253 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ZC3HC1Q86WB0 502 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF100Q8IYN0 542 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 L3MBTL4Q8NA19 623 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 OR4M2Q8NGB6 313 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 OR52N5Q8NH56 324 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 AKR7LQ8NHP1 331 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 STAG3L4Q8TBR4 150 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 DNAJA4Q8WW22 397 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ESAMQ96AP7 390 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 CNRIP1Q96F85 164 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms