RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ALG10Q5BKT4 473 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 FKBP9P1Q75LS8 142 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 LRP11Q86VZ4 500 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC30A7Q8NEW0 376 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 NEU4Q8WWR8 484 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 LIPHQ8WWY8 451 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 GEMIN6Q8WXD5 167 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 NSMAFQ92636 917 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 HDAC2Q92769 488 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 FAM162AQ96A26 154 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 HSH2DQ96JZ2 352 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 EFCAB1Q9HAE3 211 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 CDH20Q9HBT6 801 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 MYEF2Q9P2K5 600 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC7A8Q9UHI5 535 aa16.6■□□□□ 0.25
CCHCR1-210ENST00000464012 ANK3Q12955 4377 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 M0R233 179 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 SYNGR3O43761 229 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 STAMBPO95630 424 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 TSPAN19P0C672 248 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 FAM157BP0CG42 384 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 NCK1P16333 377 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 MAKP20794 623 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 CDAP32320 146 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 ALDH3B1P43353 468 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 TRAM2Q15035 370 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 FXNQ16595 210 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 SLC36A2Q495M3 483 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 IFI44LQ53G44 452 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 ARMC4Q5T2S8 1044 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 NRMQ8IXM6 262 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 OFCC1Q8IZS5 231 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 PAQR4Q8N4S7 273 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 RBM15BQ8NDT2 890 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 MDFIQ99750 246 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 HOPXQ9BPY8 73 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 KCTD14Q9BQ13 255 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 TXNIPQ9H3M7 391 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 MAN2C1Q9NTJ4 1040 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 HIF3AQ9Y2N7 669 aa16.59■□□□□ 0.25
CCHCR1-210ENST00000464012 RTTNQ86VV8 2226 aa16.58■□□□□ 0.25
CCHCR1-210ENST00000464012 TRAV27A0A087WT01 109 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 IGKV1D-43A0A0B4J1Z2 117 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 A0A1W2PPW3 197 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 CENPBD1B2RD01 187 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 LYNX1G3V0Z9 82 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 LYNX1P0DP58 116 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 TCN1P20061 433 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 GZMKP49863 264 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 SEC24CP53992 1094 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 ALKBH6Q3KRA9 238 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 C8orf82Q6P1X6 216 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 CBLL1Q75N03 491 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 OR51A7Q8NH64 312 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 SEPHS2Q99611 448 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 CHODLQ9H9P2 273 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 STX18Q9P2W9 335 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 REV1Q9UBZ9 1251 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 DUSP13Q9UII6 198 aa16.58■□□□□ 0.24
CCHCR1-210ENST00000464012 IQCMA0A1B0GVH7 501 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 LRP5LA4QPB2 252 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 FFAR1O14842 300 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 CTXN1P60606 82 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 HSF2Q03933 536 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 PLP2Q04941 152 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 TBC1D28Q2M2D7 210 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 C10orf128Q5T292 105 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 RGS7BPQ6MZT1 257 aaPredicted RBP16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 ZNF730Q6ZMV8 503 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 DPPA2Q7Z7J5 298 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 CLDN22Q8N7P3 220 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 ICA1LQ8NDH6 482 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 OR13C2Q8NGS9 318 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 UBASH3BQ8TF42 649 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 KCNN2Q9H2S1 579 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 CCNB1IP1Q9NPC3 277 aa16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 ZNF346Q9UL40 294 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-210ENST00000464012 LOC100289279A0A1B0GTE1 492 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 NPIPB13A6NJU9 1138 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 EFCAB9A8MZ26 197 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 NPIPB4C9JG80 1138 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 LMX1BO60663 402 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 LCKP06239 509 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 ZNF23P17027 643 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 APEX1P27695 318 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 GPR4P46093 362 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 EVX1P49640 407 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 ZNF133P52736 654 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 PSME3P61289 254 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 RPL27P61353 136 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 ERVS71-1P61550 626 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 SGCAQ16586 387 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 NRN1LQ496H8 165 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 FAM166AQ6J272 317 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 OAFQ86UD1 273 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 ARIH2OSQ8N7S6 290 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 ZNF540Q8NDQ6 660 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 NABP1Q96AH0 204 aa16.56■□□□□ 0.24
CCHCR1-210ENST00000464012 MSI2Q96DH6 328 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms