RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 WDFY1Q8IWB7 410 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 ZNF786Q8N393 782 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 POU5F2Q8N7G0 328 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 PFN4Q8NHR9 129 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 ACOT11Q8WXI4 607 aaPredicted RBP13.83□□□□□ -0.2
SGCE-208ENST00000450385 BCL2L14Q9BZR8 327 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 NSRP1Q9H0G5 558 aaKnown RBP13.83□□□□□ -0.2
SGCE-208ENST00000450385 SEC61A2Q9H9S3 476 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 C20orf141Q9NUB4 165 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 ABCD2Q9UBJ2 740 aa13.83□□□□□ -0.2
SGCE-208ENST00000450385 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 A6NIZ1 184 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 GMNNO75496 209 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 SEC14L2O76054 403 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 F13BP05160 661 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 DAOP14920 347 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 TNFRSF1BP20333 461 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 THBS2P35442 1172 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 RAP1BP61224 184 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 RPL27P61353 136 aaKnown RBP13.82□□□□□ -0.2
SGCE-208ENST00000450385 RAP1AP62834 184 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 MRPS11P82912 194 aaKnown RBP13.82□□□□□ -0.2
SGCE-208ENST00000450385 MELKQ14680 651 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 RAB39AQ14964 217 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 CHRFAM7AQ494W8 412 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 KRT80Q6KB66 452 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 RRM2BQ7LG56 351 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 PRIMA1Q86XR5 153 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 SLC30A7Q8NEW0 376 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 HPS1Q92902 700 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 KCNK17Q96T54 332 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 RNF121Q9H920 327 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 DYNLRB1Q9NP97 96 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 REV1Q9UBZ9 1251 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 TMEM5Q9Y2B1 443 aa13.82□□□□□ -0.2
SGCE-208ENST00000450385 M0R233 179 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 NME4O00746 187 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 STAMBPO95630 424 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 IFI30P13284 250 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 ZNF23P17027 643 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 SLC7A2P52569 658 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 PCBD1P61457 104 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 LAPTM4AQ15012 233 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 TBC1D28Q2M2D7 210 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 TMPRSS11FQ6ZWK6 438 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 MBOAT2Q6ZWT7 520 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 FKBP9P1Q75LS8 142 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 SYT9Q86SS6 491 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 OAFQ86UD1 273 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 ZNF584Q8IVC4 421 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 SVOPLQ8N434 492 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 OR4K5Q8NGD3 323 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 UBASH3BQ8TF42 649 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 HTRA1Q92743 480 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 FOXN4Q96NZ1 517 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 ZNF347Q96SE7 839 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 KCTD14Q9BQ13 255 aaPredicted RBP13.81□□□□□ -0.2
SGCE-208ENST00000450385 MYLK2Q9H1R3 596 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 SPAG4Q9NPE6 437 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
SGCE-208ENST00000450385 ANK3Q12955 4377 aaKnown RBP13.81□□□□□ -0.2
SGCE-208ENST00000450385 A0A1W2PRQ8 180 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 GPRIN2O60269 458 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 SHOX2O60902 331 aaPredicted RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 ZNF682O95780 498 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 TACSTD2P09758 323 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 SAGP10523 405 aaPredicted RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 ZNF250P15622 560 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 GSK3BP49841 420 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 NUDT2P50583 147 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 RUNX1T1Q06455 604 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 SF3A3Q12874 501 aaKnown RBP eCLIP13.8□□□□□ -0.2
SGCE-208ENST00000450385 DGCR6Q14129 220 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 SPATS1Q496A3 300 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 FAM209AQ5JX71 171 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 FAM27BQ5VT28 67 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 VTCN1Q7Z7D3 282 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 ALDH16A1Q8IZ83 802 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 SYT14Q8NB59 555 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 ZNF519Q8TB69 540 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 C11orf40Q8WZ69 217 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 NMD3Q96D46 503 aaKnown RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 SH3GL3Q99963 347 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 GORASP2Q9H8Y8 452 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 CDH20Q9HBT6 801 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 SAMD4AQ9UPU9 718 aaKnown RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 FAM32AQ9Y421 112 aaKnown RBP13.8□□□□□ -0.2
SGCE-208ENST00000450385 ENPP4Q9Y6X5 453 aa13.8□□□□□ -0.2
SGCE-208ENST00000450385 EFCAB9A8MZ26 197 aa13.79□□□□□ -0.2
SGCE-208ENST00000450385 SNX3O60493 162 aa13.79□□□□□ -0.2
SGCE-208ENST00000450385 SERPINA1P01009 418 aa13.79□□□□□ -0.2
SGCE-208ENST00000450385 ADRA2AP08913 450 aa13.79□□□□□ -0.2
SGCE-208ENST00000450385 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
SGCE-208ENST00000450385 FAM157CP0CG43 387 aa13.79□□□□□ -0.2
SGCE-208ENST00000450385 IGHV4-31P0DP07 118 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms