RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 IGKV1D-43A0A0B4J1Z2 117 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 A1L4Q6 167 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 SLC2A10O95528 541 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 ATP6V1G2O95670 118 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 HMGN1P05114 100 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 PPP3CBP16298 524 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 ZNF3P17036 446 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 EPHA2P29317 976 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 ZNF84P51523 738 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
CTSS-202ENST00000448301 TSC22D1Q15714 1073 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 SLX4IPQ5VYV7 408 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 TMEM236Q5W0B7 351 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 SLC37A3Q8NCC5 494 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 NPEPL1Q8NDH3 523 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 S100PBPQ96BU1 408 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 RDH12Q96NR8 316 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 DDOQ99489 341 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 FOXB1Q99853 325 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 PRRG3Q9BZD7 231 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 ACTR6Q9GZN1 396 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 NELFAQ9H3P2 528 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 RIBC2Q9H4K1 309 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 ADGRG4Q8IZF6 3080 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 LRRK2Q5S007 2527 aa12.32□□□□□ -0.44
CTSS-202ENST00000448301 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 OR5H1A6NKK0 313 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 RIIAD1A6NNX1 92 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 SURF4O15260 269 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 CTLA4P16410 223 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 CRABP1P29762 137 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 CRMP1Q14194 572 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 LRRC36Q1X8D7 754 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 NRN1LQ496H8 165 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 TIMM23BQ5SRD1 257 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 C1QTNF12Q5T7M4 302 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 ANKRD16Q6P6B7 361 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 DNM1P34Q6PK57 102 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 FOXL2NBQ6ZUU3 175 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 P2RY8Q86VZ1 359 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
CTSS-202ENST00000448301 SLC38A2Q96QD8 506 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 GRIP2Q9C0E4 1043 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 NUAK2Q9H093 628 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 TMEM38BQ9NVV0 291 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 UGT2A1Q9Y4X1 527 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
CTSS-202ENST00000448301 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
CTSS-202ENST00000448301 TUBAL3A6NHL2 446 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 E9PQ18 207 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 SLC16A7O60669 478 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 KHDRBS3O75525 346 aaKnown RBP12.3□□□□□ -0.44
CTSS-202ENST00000448301 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
CTSS-202ENST00000448301 POLR2IP36954 125 aaKnown RBP12.3□□□□□ -0.44
CTSS-202ENST00000448301 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 C12orf73Q69YU5 71 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 ZNF813Q6ZN06 617 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 SSX8Q7RTT4 187 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 ZBTB46Q86UZ6 589 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 GALNT4Q8N4A0 578 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 NSMAFQ92636 917 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 BCL2L2Q92843 193 aaPredicted RBP12.3□□□□□ -0.44
CTSS-202ENST00000448301 MBOAT4Q96T53 435 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 TOR3AQ9H497 397 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 RPRD1BQ9NQG5 326 aaKnown RBP12.3□□□□□ -0.44
CTSS-202ENST00000448301 SLC17A5Q9NRA2 495 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 SMPD3Q9NY59 655 aaPredicted RBP12.3□□□□□ -0.44
CTSS-202ENST00000448301 B9D1Q9UPM9 204 aa12.3□□□□□ -0.44
CTSS-202ENST00000448301 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 IGLV1-36A0A0B4J1U3 117 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 SH3D21A4FU49 640 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 SEC14L2O76054 403 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 SNAP29O95721 258 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 B4GALT1P15291 398 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 NPR2P20594 1047 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 HOXC12P31275 282 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 SLC25A1P53007 311 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 MRPS34P82930 218 aaKnown RBP12.29□□□□□ -0.44
CTSS-202ENST00000448301 ETFDHQ16134 617 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 SNAPC1Q16533 368 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 ZIK1Q3SY52 487 aaPredicted RBP12.29□□□□□ -0.44
CTSS-202ENST00000448301 HIKESHIQ53FT3 197 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 KLHL24Q6TFL4 600 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 MEX3BQ6ZN04 569 aaKnown RBP12.29□□□□□ -0.44
CTSS-202ENST00000448301 OR6V1Q8N148 313 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 CYB561A3Q8NBI2 242 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 OR2T4Q8NH00 348 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 HSD17B8Q92506 261 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 PLEKHA8Q96JA3 519 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 HRASLS5Q96KN8 279 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 DACH2Q96NX9 599 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 TSSK2Q96PF2 358 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 NMNAT2Q9BZQ4 307 aa12.29□□□□□ -0.44
CTSS-202ENST00000448301 VCXQ9H320 206 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms